RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 THG1LQ9NWX6 298 aaKnown RBP15.03■□□□□ -0
SHKBP1-218ENST00000598907 MBD1Q9UIS9 605 aaPredicted RBP15.03■□□□□ -0
SHKBP1-218ENST00000598907 HOOK1Q9UJC3 728 aaKnown RBP15.03■□□□□ -0
SHKBP1-218ENST00000598907 KIAA1549LQ6ZVL6 1849 aa15.03■□□□□ -0
SHKBP1-218ENST00000598907 FRMD3A2A2Y4 597 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 OTOL1A6NHN0 477 aaPredicted RBP15.02■□□□□ -0
SHKBP1-218ENST00000598907 TRDMT1O14717 391 aaKnown RBP15.02■□□□□ -0
SHKBP1-218ENST00000598907 SYN3O14994 580 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 KLRC4O43908 158 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 OR4Q2P0C623 313 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 GABRR2P28476 465 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 CASP1P29466 404 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 ATXN3P54252 364 aaPredicted RBP15.02■□□□□ -0
SHKBP1-218ENST00000598907 EPHB3P54753 998 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 ZNF423Q2M1K9 1284 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 ARHGAP15Q53QZ3 475 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 GAREM2Q75VX8 874 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 C11orf74Q86VG3 221 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 PNPLA1Q8N8W4 532 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 SYAP1Q96A49 352 aaPredicted RBP15.02■□□□□ -0
SHKBP1-218ENST00000598907 ACDQ96AP0 544 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 BLZF1Q9H2G9 400 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 KIAA1468Q9P260 1216 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 EBF1Q9UH73 591 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 EVLQ9UI08 416 aaPredicted RBP15.02■□□□□ -0
SHKBP1-218ENST00000598907 PCDHA5Q9Y5H7 936 aa15.02■□□□□ -0
SHKBP1-218ENST00000598907 TRIP11Q15643 1979 aa15.02□□□□□ -0.01
SHKBP1-218ENST00000598907 APC2O95996 2303 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 NPHP3-ACAD11A0A0J9YXS1 232 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 PVALEFA0A1B0GWK0 134 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 SOAT2O75908 522 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 C1QL1O75973 258 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 ARSAP15289 507 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 ZNF131P52739 623 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 EHHADHQ08426 723 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 MAPK7Q13164 816 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 PLD1Q13393 1074 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 RUNX3Q13761 415 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 DAW1Q8N136 415 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 REEP2Q9BRK0 252 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 CRISPLD1Q9H336 500 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 OBP2AQ9NY56 170 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 ODF2LQ9ULJ1 636 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 ADAMTS9Q9P2N4 1935 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 MYO16Q9Y6X6 1858 aa15.01□□□□□ -0.01
SHKBP1-218ENST00000598907 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 SMIM28A0A1B0GU29 152 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 VNN2O95498 520 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 PLA2G2AP14555 144 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 DRD1P21728 446 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 PTGER3P43115 390 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 GALK1P51570 392 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 OSTNP61366 133 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 DUSP4Q13115 394 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 MRPL58Q14197 206 aaKnown RBP15□□□□□ -0.01
SHKBP1-218ENST00000598907 KCNB1Q14721 858 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 MAPK6Q16659 721 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 DCAF4L1Q3SXM0 396 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 CDCA2Q69YH5 1023 aaPredicted RBP15□□□□□ -0.01
SHKBP1-218ENST00000598907 UNC13DQ70J99 1090 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 DYMQ7RTS9 669 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 TMEFF1Q8IYR6 380 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 MCPH1Q8NEM0 835 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 OR2I1PQ8NGU4 316 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 EZH1Q92800 747 aaPredicted RBP15□□□□□ -0.01
SHKBP1-218ENST00000598907 ERCC4Q92889 916 aaPredicted RBP15□□□□□ -0.01
SHKBP1-218ENST00000598907 GSDMAQ96QA5 445 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 P2RY13Q9BPV8 354 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 FZD8Q9H461 694 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 SCUBE2Q9NQ36 999 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 TMEM74BQ9NUR3 256 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 SLC27A5Q9Y2P5 690 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 TNRC6BQ9UPQ9 1833 aaKnown RBP15□□□□□ -0.01
SHKBP1-218ENST00000598907 ACACAQ13085 2346 aa15□□□□□ -0.01
SHKBP1-218ENST00000598907 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 HIP1RO75146 1068 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 RPN1P04843 607 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 ALDH1A3P47895 512 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 FAM187BQ17R55 369 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 LPCAT2Q7L5N7 544 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 TTC9BQ8N6N2 239 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 CEP120Q8N960 986 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 TTC16Q8NEE8 873 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 RLN3Q8WXF3 142 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 SMARCE1Q969G3 411 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 CAMK1GQ96NX5 476 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 PCNX2A6NKB5 2137 aa14.99□□□□□ -0.01
SHKBP1-218ENST00000598907 MAP3K13O43283 966 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 RHOBTB3O94955 611 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 LETM1O95202 739 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 SMC2O95347 1197 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 CDR1P51861 262 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 SEC13P55735 322 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 ASIC1P78348 528 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 RAD51AP2Q09MP3 1159 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 KMT5BQ4FZB7 885 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 FBXO43Q4G163 708 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 CCNI2Q6ZMN8 369 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 DNAJB7Q7Z6W7 309 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 SYT12Q8IV01 421 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms