RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 TUFMP49411 452 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 CYP27A1Q02318 531 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 KCNMA1Q12791 1236 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 CUL2Q13617 745 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 MAN2A1Q16706 1144 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 CFAP221Q4G0U5 840 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 VWA3BQ502W6 1294 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 ZNF394Q53GI3 561 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 PRSS36Q5K4E3 855 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 GJB7Q6PEY0 223 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 RRAGAQ7L523 313 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 UNC93AQ86WB7 457 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 SPATA2LQ8IUW3 424 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 DHX40Q8IX18 779 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 FUKQ8N0W3 1084 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 GJD3Q8N144 294 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 AOPEPQ8N6M6 819 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 KREMEN1Q96MU8 473 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 TAB2Q9NYJ8 693 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 MAGEC2Q9UBF1 373 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 TCF20Q9UGU0 1960 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 A0A0C4DFX4 3053 aa15.14■□□□□ 0.01
SHKBP1-217ENST00000598558 C5orf42Q9H799 3197 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 RNF225M0QZC1 329 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 CALCAP01258 141 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 CCDC130P13994 396 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 ZNF18P17022 549 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 PTMSP20962 102 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 FSHRP23945 695 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 RAD23BP54727 409 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 EPHA5P54756 1037 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 MYL5Q02045 173 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 IQCB1Q15051 598 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 KRT31Q15323 416 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 ZSCAN23Q3MJ62 389 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 PABPC1LQ4VXU2 614 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 APTXQ7Z2E3 356 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 SCN4BQ8IWT1 228 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 SLC4A11Q8NBS3 891 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 CCDC150Q8NCX0 1101 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 ING5Q8WYH8 240 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 PSMG2Q969U7 264 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 FUBP3Q96I24 572 aaKnown RBP eCLIP15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 FAXDC2Q96IV6 333 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 ZNF512Q96ME7 567 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 NDST4Q9H3R1 872 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 IL21Q9HBE4 155 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 ABCB6Q9NP58 842 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 SIX2Q9NPC8 291 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 AVENQ9NQS1 362 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 FAM49BQ9NUQ9 324 aa15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 AJAP1Q9UKB5 411 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-217ENST00000598558 BEST1O76090 585 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 MYL4P12829 197 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 ATP1A3P13637 1013 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 PRKCSHP14314 528 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 CEBPBP17676 345 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 PON1P27169 355 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 MAGEA11P43364 429 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 EPHB3P54753 998 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 SKOR2Q2VWA4 1001 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 C4orf50Q6ZRC1 276 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 GAREM2Q75VX8 874 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 GET4Q7L5D6 327 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 TMEM150AQ86TG1 271 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 FAM114A1Q8IWE2 563 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 ZMIZ2Q8NF64 920 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 SHKBP1Q8TBC3 707 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 ZSWIM3Q96MP5 696 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 NT5C1BQ96P26 610 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 KCNK16Q96T55 309 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 NT5C1AQ9BXI3 368 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 VPS16Q9H269 839 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 LIMD1Q9UGP4 676 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 USTQ9Y2C2 406 aa15.12■□□□□ 0.01
SHKBP1-217ENST00000598558 MTCL1Q9Y4B5 1905 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 SLC38A8A6NNN8 435 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 F8VP50 259 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 LETM1O95202 739 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 EEF1GP26641 437 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 USP46P62068 366 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 MAPRE1Q15691 268 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 TRIM65Q6PJ69 517 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 FAM35AQ86V20 835 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 RNF135Q8IUD6 432 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 NPAS3Q8IXF0 933 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 PPM1KQ8N3J5 372 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 SLC2A14Q8TDB8 520 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 FGF13Q92913 245 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 MCRS1Q96EZ8 462 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 TMEM176AQ96HP8 235 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 TNIP3Q96KP6 325 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 SMOQ99835 787 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 BPIFA3Q9BQP9 254 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 ZSWIM1Q9BR11 485 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 GCNT4Q9P109 453 aa15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 LIMA1Q9UHB6 759 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 MRPS23Q9Y3D9 190 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-217ENST00000598558 F11P03951 625 aa15.1■□□□□ 0.01
SHKBP1-217ENST00000598558 ASGR2P07307 311 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms