RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 POU5F1Q01860 360 aaKnown RBP13□□□□□ -0.33
SOX2-OT-228ENST00000597828 RUNX3Q13761 415 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 C1orf228Q6PIY5 440 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 LONP2Q86WA8 852 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 ADGRF2Q8IZF7 708 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 GPR161Q8N6U8 529 aaKnown RBP13□□□□□ -0.33
SOX2-OT-228ENST00000597828 OR5B17Q8NGF7 314 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 LEO1Q8WVC0 666 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-228ENST00000597828 FBRSL1Q9HCM7 1045 aaKnown RBP13□□□□□ -0.33
SOX2-OT-228ENST00000597828 TRPC7Q9HCX4 862 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 LAMA1P25391 3075 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 GDF9O60383 454 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 HUS1O60921 280 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 NOL4O94818 638 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 LDHAP00338 332 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 TMEM191BP0C7N4 346 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 CSH1P0DML2 217 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 CSH2P0DML3 217 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 PDCP20941 246 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 MYL7Q01449 175 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 SMARCB1Q12824 385 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 CCDC6Q16204 474 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 NFE2Q16621 373 aaPredicted RBP12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 SOWAHAQ2M3V2 549 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 TMEM196Q5HYL7 178 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 CCDC73Q6ZRK6 1079 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 CBWD2Q8IUF1 395 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 GPD1LQ8N335 351 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 FAM160A2Q8N612 972 aaPredicted RBP12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 LRRC52Q8N7C0 313 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 KBTBD7Q8WVZ9 684 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 MRPS31Q92665 395 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 ACBD6Q9BR61 282 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 SEMA4GQ9NTN9 838 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 TDP1Q9NUW8 608 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 THG1LQ9NWX6 298 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 ITGA11Q9UKX5 1188 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 NME7Q9Y5B8 376 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 PCDHB13Q9Y5F0 798 aa12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 MAP1BP46821 2468 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 CNOT1A5YKK6 2376 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-228ENST00000597828 TP53BP1Q12888 1972 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 PRR5-ARHGAP8B1AHC4 643 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 RNF40O75150 1001 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 RETP07949 1114 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 HOXD13P35453 343 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 ARHGAP8P85298 464 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 USP4Q13107 963 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 MTF1Q14872 753 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 SLC39A14Q15043 492 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 ZNF77Q15935 545 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 PRR23CQ6ZRP0 262 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 CEP68Q76N32 757 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 MON1AQ86VX9 555 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 WDR5BQ86VZ2 330 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 SCN4BQ8IWT1 228 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 CACTINQ8WUQ7 758 aaKnown RBP12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 EZH1Q92800 747 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 MYLPFQ96A32 169 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 CYP2S1Q96SQ9 504 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 KIF9Q9HAQ2 790 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 INTS13Q9NVM9 706 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 GDAP2Q9NXN4 497 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 WNT6Q9Y6F9 365 aa12.98□□□□□ -0.33
SOX2-OT-228ENST00000597828 CACNA1BQ00975 2339 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 C2orf78A6NCI8 922 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 ANTXRLA6NF34 631 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 GABRDO14764 452 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 LMO2P25791 158 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 DDX6P26196 483 aaKnown RBP eCLIP12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 GJA4P35212 333 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 NASPP49321 788 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 RPL10AP62906 217 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 ALCAMQ13740 583 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 STK38Q15208 465 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 E2F4Q16254 413 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 SPATA2LQ8IUW3 424 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 TMEM86AQ8N2M4 240 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 TOP6BLQ8N6T0 577 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 TRMT2BQ96GJ1 504 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 ANKRD36BP1Q96IX9 119 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 CNTNAP3BQ96NU0 1288 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 HHIPQ96QV1 700 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 SYT15Q9BQS2 421 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 RTKNQ9BST9 563 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 CNTNAP3Q9BZ76 1288 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 ABCB6Q9NP58 842 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 CRTAC1Q9NQ79 661 aa12.97□□□□□ -0.33
SOX2-OT-228ENST00000597828 TPRP12270 2363 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 TRDMT1O14717 391 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 CKMP06732 381 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 CASP1P29466 404 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 CNR2P34972 360 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 USP46P62068 366 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 RBP5P82980 135 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 FAM160A1Q05DH4 1040 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 ZNF268Q14587 947 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 CSRP2Q16527 193 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 CFAP221Q4G0U5 840 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms