RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 MAPRE1Q15691 268 aaKnown RBP15.52■□□□□ 0.08
VRK3-212ENST00000596814 PKDCCQ504Y2 493 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 FAM171BQ6P995 826 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 ANKS3Q6ZW76 656 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 TAS1R1Q7RTX1 841 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 TTC30AQ86WT1 665 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 FUKQ8N0W3 1084 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 UBA3Q8TBC4 463 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 SECISBP2LQ93073 1101 aaKnown RBP15.52■□□□□ 0.08
VRK3-212ENST00000596814 MYLPFQ96A32 169 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 PCED1BQ96HM7 432 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 TMEM209Q96SK2 561 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 PKMYT1Q99640 499 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 HNRNPABQ99729 332 aaKnown RBP15.52■□□□□ 0.08
VRK3-212ENST00000596814 MED10Q9BTT4 135 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 HERC2P3Q9BVR0 1158 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 UBE2OQ9C0C9 1292 aaKnown RBP15.52■□□□□ 0.08
VRK3-212ENST00000596814 TRIM10Q9UDY6 481 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 GTF3C4Q9UKN8 822 aa15.52■□□□□ 0.08
VRK3-212ENST00000596814 PTPRDP23468 1912 aa15.52■□□□□ 0.07
VRK3-212ENST00000596814 OR6C75A6NL08 312 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 SETSIPP0DME0 302 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 GPD2P43304 727 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 RABGGTBP53611 331 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 PLCB3Q01970 1234 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 BST2Q10589 180 aaKnown RBP15.51■□□□□ 0.07
VRK3-212ENST00000596814 MON1BQ7L1V2 547 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 FAM35AQ86V20 835 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 PHF13Q86YI8 300 aaPredicted RBP15.51■□□□□ 0.07
VRK3-212ENST00000596814 WDTC1Q8N5D0 677 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 ANKRD52Q8NB46 1076 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 TRIM11Q96F44 468 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 NOX5Q96PH1 765 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 C11orf70Q9BRQ4 267 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 B3GNT5Q9BYG0 378 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 ZCWPW1Q9H0M4 648 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 THAP2Q9H0W7 228 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 CLDN5O00501 218 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 MMP8P22894 467 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 C1QBPQ07021 282 aaKnown RBP15.51■□□□□ 0.07
VRK3-212ENST00000596814 PDCLQ13371 301 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 KIAA1841Q6NSI8 718 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 DDX53Q86TM3 631 aaKnown RBP15.51■□□□□ 0.07
VRK3-212ENST00000596814 DCP1BQ8IZD4 617 aaKnown RBP15.51■□□□□ 0.07
VRK3-212ENST00000596814 MCOLN2Q8IZK6 566 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 MSANTD4Q8NCY6 345 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 RIN2Q8WYP3 895 aaPredicted RBP15.51■□□□□ 0.07
VRK3-212ENST00000596814 PIK3R5Q8WYR1 880 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 ZNF653Q96CK0 615 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 GDF15Q99988 308 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 OXCT2Q9BYC2 517 aaPredicted RBP15.51■□□□□ 0.07
VRK3-212ENST00000596814 CHST7Q9NS84 486 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 KRT82Q9NSB4 513 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 ADAM22Q9P0K1 906 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 STK39Q9UEW8 545 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 CYTH4Q9UIA0 394 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 GUCA1BQ9UMX6 200 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 RWDD3Q9Y3V2 267 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 PLXNA4Q9HCM2 1894 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 NCANO14594 1321 aa15.51■□□□□ 0.07
VRK3-212ENST00000596814 ZNF500O60304 480 aaPredicted RBP15.5■□□□□ 0.07
VRK3-212ENST00000596814 FGF18O76093 207 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 CALB1P05937 261 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 OR4Q2P0C623 313 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 FAM200BP0CF97 657 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 MYBL1P10243 752 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 NPR3P17342 541 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 CTNNB1P35222 781 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 SLC8A3P57103 927 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 GPC5P78333 572 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 KRT17Q04695 432 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 PDE4CQ08493 712 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 PSMD5Q16401 504 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 PTPN20Q4JDL3 420 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 PRSS55Q6UWB4 352 aaPredicted RBP15.5■□□□□ 0.07
VRK3-212ENST00000596814 C4orf50Q6ZRC1 276 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 MMS22LQ6ZRQ5 1243 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 PAQR9Q6ZVX9 377 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 LRRTM3Q86VH5 581 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 ERICH1Q86X53 443 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 SMARCD1Q96GM5 515 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 VCPIP1Q96JH7 1222 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 DUSP16Q9BY84 665 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 TMLHEQ9NVH6 421 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 MTRRQ9UBK8 725 aa15.5■□□□□ 0.07
VRK3-212ENST00000596814 LINC01553A4QN01 128 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 BTNL10A8MVZ5 291 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 GRXCR1A8MXD5 290 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 H0YGN5 161 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 ATMINO43313 823 aaPredicted RBP15.49■□□□□ 0.07
VRK3-212ENST00000596814 TBC1D4O60343 1298 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 AP1G2O75843 785 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 ABL1P00519 1130 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 URODP06132 367 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 GLUD2P49448 558 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 DSG1Q02413 1049 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 PTP4A2Q12974 167 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 SLC39A12Q504Y0 691 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 LIN9Q5TKA1 542 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 FAM109BQ6ICB4 259 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms