RNA–Protein interactions for RNA: ENST00000596271.1

SAMD4B-204, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-204ENST00000596271 MYL7Q01449 175 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 GRSF1Q12849 480 aaKnown RBP eCLIP12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 SIM2Q14190 667 aaPredicted RBP12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 GAS6Q14393 721 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 MAPRE1Q15691 268 aaKnown RBP12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 CSRP2Q16527 193 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 ZC2HC1CQ53FD0 456 aaPredicted RBP12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 TMEM196Q5HYL7 178 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 TSSK4Q6SA08 328 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 LRRTM3Q86VH5 581 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 CAMKK1Q8N5S9 505 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 TOP6BLQ8N6T0 577 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 MRPS31Q92665 395 aaKnown RBP12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 CHAMP1Q96JM3 812 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 LRRC3BQ96PB8 259 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 SEPT5Q99719 369 aaPredicted RBP12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 ANP32EQ9BTT0 268 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 TDP1Q9NUW8 608 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 FRYLO94915 3013 aa12.67□□□□□ -0.38
SAMD4B-204ENST00000596271 SCN1AP35498 2009 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 COL4A2P08572 1712 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 GABRDO14764 452 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 SLC30A4O14863 429 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 EXTL3O43909 919 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 DRD1P21728 446 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 MAGEA11P43364 429 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 ATXN1P54253 815 aaKnown RBP12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 SATB1Q01826 763 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 BFSP1Q12934 665 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 MYO1EQ12965 1108 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 RUNX3Q13761 415 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 CC2D1AQ6P1N0 951 aaPredicted RBP12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 KRBA2Q6ZNG9 492 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 USP49Q70CQ1 688 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 LIMS2Q7Z4I7 341 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 WDR5BQ86VZ2 330 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 SFR1Q86XK3 245 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 FMR1NBQ8N0W7 255 aaPredicted RBP12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 KBTBD4Q9NVX7 518 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 RMND1Q9NWS8 449 aa12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 R3HCC1Q9Y3T6 440 aaKnown RBP12.66□□□□□ -0.38
SAMD4B-204ENST00000596271 NCANO14594 1321 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 SDK1Q7Z5N4 2213 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 SLC38A8A6NNN8 435 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 NOL4O94818 638 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 LETM1O95202 739 aaPredicted RBP12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 PPP3CCP48454 512 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 LIMK1P53667 647 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 TFAMQ00059 246 aaKnown RBP12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 E2F4Q16254 413 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 INTS6LQ5JSJ4 861 aaKnown RBP12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 STXBP5Q5T5C0 1151 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 CNNM4Q6P4Q7 775 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 VSTM1Q6UX27 236 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 TMEM150AQ86TG1 271 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 CCDC65Q8IXS2 484 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 EFCAB13Q8IY85 973 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 PDCL2Q8N4E4 241 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 TTC9BQ8N6N2 239 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 GKN1Q9NS71 199 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 GTSE1Q9NYZ3 720 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 USP18Q9UMW8 372 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 PCDHGA5Q9Y5G8 931 aa12.65□□□□□ -0.38
SAMD4B-204ENST00000596271 NUP210Q8TEM1 1887 aaPredicted RBP12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 PVALEFA0A1B0GWK0 134 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 MED19A0JLT2 244 aaPredicted RBP12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 MYMKA6NI61 221 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 HRO43593 1189 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 GADD45BO75293 160 aaPredicted RBP12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 KIF20AO95235 890 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 PRAMEF12O95522 483 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 NR1H3Q13133 447 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 KLHL40Q2TBA0 621 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 FAM171BQ6P995 826 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 TXNDC11Q6PKC3 985 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 C4orf50Q6ZRC1 276 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 DYMQ7RTS9 669 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 C11orf74Q86VG3 221 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 C1orf127Q8N9H9 656 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 CXorf38Q8TB03 319 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 USP13Q92995 863 aaPredicted RBP12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 SPATA17Q96L03 361 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 PKMYT1Q99640 499 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 LPIN3Q9BQK8 851 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 FAM213AQ9BRX8 229 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 NUP62CLQ9H1M0 184 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 DDX43Q9NXZ2 648 aaKnown RBP12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 ABI2Q9NYB9 513 aaPredicted RBP12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 RBAKQ9NYW8 714 aaPredicted RBP12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 SERTAD1Q9UHV2 236 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 AGAP1Q9UPQ3 857 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 DNAH14Q0VDD8 3507 aa12.64□□□□□ -0.39
SAMD4B-204ENST00000596271 TICRRQ7Z2Z1 1910 aa12.63□□□□□ -0.39
SAMD4B-204ENST00000596271 ZNF233A6NK53 670 aa12.63□□□□□ -0.39
SAMD4B-204ENST00000596271 ACTN4O43707 911 aaKnown RBP12.63□□□□□ -0.39
SAMD4B-204ENST00000596271 GCNT3O95395 438 aa12.63□□□□□ -0.39
SAMD4B-204ENST00000596271 USP17L7P0C7H9 530 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms