RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 SYAP1Q96A49 352 aaPredicted RBP17.14■□□□□ 0.33
IRF3-210ENST00000595240 CCDC34Q96HJ3 373 aa17.14■□□□□ 0.33
IRF3-210ENST00000595240 OSBPL6Q9BZF3 934 aa17.14■□□□□ 0.33
IRF3-210ENST00000595240 SNX25Q9H3E2 840 aa17.14■□□□□ 0.33
IRF3-210ENST00000595240 MAPK8IP1Q9UQF2 711 aa17.14■□□□□ 0.33
IRF3-210ENST00000595240 FRMD4BQ9Y2L6 1034 aa17.14■□□□□ 0.33
IRF3-210ENST00000595240 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.33
IRF3-210ENST00000595240 NME7Q9Y5B8 376 aa17.14■□□□□ 0.33
IRF3-210ENST00000595240 COL4A3Q01955 1670 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 ZNF263O14978 683 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 LRRN2O75325 713 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 PRAMEF12O95522 483 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 CD72P21854 359 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 GNL1P36915 607 aaPredicted RBP17.13■□□□□ 0.33
IRF3-210ENST00000595240 BIRC3Q13489 604 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 NCOA4Q13772 614 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 ANGPT1Q15389 498 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 ZACNQ401N2 412 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 CEP135Q66GS9 1140 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 STKLD1Q8NE28 680 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 ENGASEQ8NFI3 743 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 MYLPFQ96A32 169 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 TRMT2BQ96GJ1 504 aaKnown RBP17.13■□□□□ 0.33
IRF3-210ENST00000595240 MYRFLQ96LU7 910 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 LRRC3BQ96PB8 259 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 SLC46A2Q9BY10 475 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 LTB4R2Q9NPC1 389 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 OBP2AQ9NY56 170 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 NXF1Q9UBU9 619 aaKnown RBP17.13■□□□□ 0.33
IRF3-210ENST00000595240 ZMYM5Q9UJ78 669 aa17.13■□□□□ 0.33
IRF3-210ENST00000595240 GOLGA6L4A6NEF3 574 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 FAM170BA6NMN3 283 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 SLC38A8A6NNN8 435 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 IKBKBO14920 756 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 MAPK13O15264 365 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 VNN1O95497 513 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 NR2F2P24468 414 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 UBXN2BQ14CS0 331 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 ZNF699Q32M78 642 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 ZCWPW2Q504Y3 356 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 C1orf220Q5T0J3 134 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 VSTM1Q6UX27 236 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 ZNF852Q6ZMS4 543 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 GPIHBP1Q8IV16 184 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 OR6B3Q8NGW1 331 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 MYCBPAPQ8TBZ2 947 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 PCED1BQ96HM7 432 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 NELL2Q99435 816 aa17.12■□□□□ 0.33
IRF3-210ENST00000595240 MAGEC2Q9UBF1 373 aaPredicted RBP17.12■□□□□ 0.33
IRF3-210ENST00000595240 MAGED2Q9UNF1 606 aaPredicted RBP17.12■□□□□ 0.33
IRF3-210ENST00000595240 SOBPA7XYQ1 873 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 PROB1E7EW31 1015 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 CHADO15335 359 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 TADA3O75528 432 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 AKAP3O75969 853 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 DDX6P26196 483 aaKnown RBP eCLIP17.11■□□□□ 0.33
IRF3-210ENST00000595240 TARSP26639 723 aaKnown RBP17.11■□□□□ 0.33
IRF3-210ENST00000595240 FAM160A1Q05DH4 1040 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 PNOCQ13519 176 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 SV2AQ7L0J3 742 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 SCN4BQ8IWT1 228 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 YAF2Q8IY57 180 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 CMTM8Q8IZV2 173 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 ZNF687Q8N1G0 1237 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 CLDN23Q96B33 292 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 SPATA17Q96L03 361 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 CEP295NLQ96MC4 621 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 SMYD3Q9H7B4 428 aa17.11■□□□□ 0.33
IRF3-210ENST00000595240 UXTQ9UBK9 157 aaPredicted RBP17.11■□□□□ 0.33
IRF3-210ENST00000595240 MRPS17Q9Y2R5 130 aaKnown RBP17.11■□□□□ 0.33
IRF3-210ENST00000595240 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 DPYSL4O14531 572 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 PTPN1P18031 435 aaKnown RBP17.1■□□□□ 0.33
IRF3-210ENST00000595240 BDNFP23560 247 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 RPL13P26373 211 aaKnown RBP17.1■□□□□ 0.33
IRF3-210ENST00000595240 NBL1P41271 181 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 VAMP7P51809 220 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 MLLT6P55198 1093 aaPredicted RBP17.1■□□□□ 0.33
IRF3-210ENST00000595240 CYP27A1Q02318 531 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 ENPEPQ07075 957 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 ZNF667Q5HYK9 610 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 MDH1BQ5I0G3 518 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 MON1AQ86VX9 555 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 SMYD4Q8IYR2 804 aaPredicted RBP17.1■□□□□ 0.33
IRF3-210ENST00000595240 SPATA20Q8TB22 786 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 BPIFB1Q8TDL5 484 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 MRPS31Q92665 395 aaKnown RBP17.1■□□□□ 0.33
IRF3-210ENST00000595240 BCO2Q9BYV7 579 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 SMG9Q9H0W8 520 aaKnown RBP17.1■□□□□ 0.33
IRF3-210ENST00000595240 DPEP3Q9H4B8 488 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 RMND1Q9NWS8 449 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 PIAS3Q9Y6X2 628 aa17.1■□□□□ 0.33
IRF3-210ENST00000595240 F5P12259 2224 aa17.09■□□□□ 0.33
IRF3-210ENST00000595240 A8MXQ7 604 aa17.09■□□□□ 0.33
IRF3-210ENST00000595240 MAGEA9P43362 315 aa17.09■□□□□ 0.33
IRF3-210ENST00000595240 CDH8P55286 799 aa17.09■□□□□ 0.33
IRF3-210ENST00000595240 FZD5Q13467 585 aa17.09■□□□□ 0.33
IRF3-210ENST00000595240 SGSM1Q2NKQ1 1148 aa17.09■□□□□ 0.33
IRF3-210ENST00000595240 EDRF1Q3B7T1 1238 aa17.09■□□□□ 0.33
IRF3-210ENST00000595240 ARHGAP29Q52LW3 1261 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms