RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SCAND2PQ9GZW5 306 aaPredicted RBP25.13■■□□□ 1.61
LSM4-204ENST00000594828 MAGEC2Q9UBF1 373 aaPredicted RBP25.13■■□□□ 1.61
LSM4-204ENST00000594828 UXTQ9UBK9 157 aaPredicted RBP25.13■■□□□ 1.61
LSM4-204ENST00000594828 FBXO4Q9UKT5 387 aa25.13■■□□□ 1.61
LSM4-204ENST00000594828 USP34Q70CQ2 3546 aa25.12■■□□□ 1.61
LSM4-204ENST00000594828 CCNE1P24864 410 aa25.12■■□□□ 1.61
LSM4-204ENST00000594828 DDX6P26196 483 aaKnown RBP eCLIP25.12■■□□□ 1.61
LSM4-204ENST00000594828 KPNA1P52294 538 aaPredicted RBP25.12■■□□□ 1.61
LSM4-204ENST00000594828 PSMC1P62191 440 aaKnown RBP25.12■■□□□ 1.61
LSM4-204ENST00000594828 MAPRE1Q15691 268 aaKnown RBP25.12■■□□□ 1.61
LSM4-204ENST00000594828 WDR72Q3MJ13 1102 aa25.12■■□□□ 1.61
LSM4-204ENST00000594828 SCN4BQ8IWT1 228 aa25.12■■□□□ 1.61
LSM4-204ENST00000594828 CELF5Q8N6W0 485 aaKnown RBP25.12■■□□□ 1.61
LSM4-204ENST00000594828 MRPS31Q92665 395 aaKnown RBP25.12■■□□□ 1.61
LSM4-204ENST00000594828 ZFYVE19Q96K21 471 aa25.12■■□□□ 1.61
LSM4-204ENST00000594828 SMG9Q9H0W8 520 aaKnown RBP25.12■■□□□ 1.61
LSM4-204ENST00000594828 GZF1Q9H116 711 aaPredicted RBP25.12■■□□□ 1.61
LSM4-204ENST00000594828 C8orf33Q9H7E9 229 aaPredicted RBP25.12■■□□□ 1.61
LSM4-204ENST00000594828 CRTAC1Q9NQ79 661 aa25.12■■□□□ 1.61
LSM4-204ENST00000594828 THG1LQ9NWX6 298 aaKnown RBP25.12■■□□□ 1.61
LSM4-204ENST00000594828 TICRRQ7Z2Z1 1910 aa25.12■■□□□ 1.61
LSM4-204ENST00000594828 FAM237AA0A1B0GTK4 181 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 SLC38A8A6NNN8 435 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 SOBPA7XYQ1 873 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 PHACTR2O75167 634 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 NOL4O94818 638 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 FAM163BP0C2L3 166 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 GNL1P36915 607 aaPredicted RBP25.11■■□□□ 1.61
LSM4-204ENST00000594828 AVPR1AP37288 418 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 NDUFA8P51970 172 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 TNNC1P63316 161 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 ZNF528Q3MIS6 628 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 TXNDC8Q6A555 127 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 C1orf228Q6PIY5 440 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 TRMT2BQ96GJ1 504 aaKnown RBP25.11■■□□□ 1.61
LSM4-204ENST00000594828 MSANTD3Q96H12 275 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 MRPL45Q9BRJ2 306 aaKnown RBP25.11■■□□□ 1.61
LSM4-204ENST00000594828 SNX25Q9H3E2 840 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 LMAN1LQ9HAT1 526 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 COL4A2P08572 1712 aa25.11■■□□□ 1.61
LSM4-204ENST00000594828 TACC1O75410 805 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 RPN1P04843 607 aaKnown RBP25.1■■□□□ 1.61
LSM4-204ENST00000594828 ATICP31939 592 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 MAGEA11P43364 429 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 CASP4P49662 377 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 MYL6P60660 151 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 PLCB2Q00722 1185 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 CSTF1Q05048 431 aaKnown RBP25.1■■□□□ 1.61
LSM4-204ENST00000594828 MON1AQ86VX9 555 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 SLC9A9Q8IVB4 645 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 OR6B3Q8NGW1 331 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 MYLPFQ96A32 169 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 MYRFLQ96LU7 910 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 KCTD10Q9H3F6 313 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 DMAC2Q9NW81 257 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 GTSE1Q9NYZ3 720 aa25.1■■□□□ 1.61
LSM4-204ENST00000594828 ZFHX2Q9C0A1 2572 aaPredicted RBP25.1■■□□□ 1.61
LSM4-204ENST00000594828 NUP210Q8TEM1 1887 aaPredicted RBP25.1■■□□□ 1.61
LSM4-204ENST00000594828 PDXKO00764 312 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 STAU1O95793 577 aaKnown RBP25.09■■□□□ 1.61
LSM4-204ENST00000594828 LMNAP02545 664 aaKnown RBP25.09■■□□□ 1.61
LSM4-204ENST00000594828 AP3M2P53677 418 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 CYP27A1Q02318 531 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 MTAPQ13126 283 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 VSTM1Q6UX27 236 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 ADSSL1Q8N142 457 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 TTC8Q8TAM2 541 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 MYCBPAPQ8TBZ2 947 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 PLEKHO2Q8TD55 490 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 PARD3BQ8TEW8 1205 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 TMEM174Q8WUU8 243 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 CCDC47Q96A33 483 aaKnown RBP25.09■■□□□ 1.61
LSM4-204ENST00000594828 SYAP1Q96A49 352 aaPredicted RBP25.09■■□□□ 1.61
LSM4-204ENST00000594828 CHRDQ9H2X0 955 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 TDP1Q9NUW8 608 aa25.09■■□□□ 1.61
LSM4-204ENST00000594828 NXF1Q9UBU9 619 aaKnown RBP25.09■■□□□ 1.61
LSM4-204ENST00000594828 CACNA1IQ9P0X4 2223 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 A0A1W2PQ27 194 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 A0A1W2PQ64 194 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 A0A1W2PQD8 194 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 BDNFP23560 247 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 GRIK1P39086 918 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 SOX9P48436 509 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 BIRC3Q13489 604 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 RALGPS2Q86X27 583 aaPredicted RBP25.08■■□□□ 1.61
LSM4-204ENST00000594828 FSIP1Q8NA03 581 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 USP13Q92995 863 aaPredicted RBP25.08■■□□□ 1.61
LSM4-204ENST00000594828 PCED1BQ96HM7 432 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 XYLT2Q9H1B5 865 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 CCL26Q9Y258 94 aa25.08■■□□□ 1.61
LSM4-204ENST00000594828 MYO15AQ9UKN7 3530 aa25.08■■□□□ 1.6
LSM4-204ENST00000594828 LRRIQ3A6PVS8 624 aaPredicted RBP25.07■■□□□ 1.6
LSM4-204ENST00000594828 SPECC1L-ADORA2AF8WAN1 911 aa25.07■■□□□ 1.6
LSM4-204ENST00000594828 KIF20AO95235 890 aa25.07■■□□□ 1.6
LSM4-204ENST00000594828 NR3C1P04150 777 aa25.07■■□□□ 1.6
LSM4-204ENST00000594828 CHRNB1P11230 501 aa25.07■■□□□ 1.6
LSM4-204ENST00000594828 CLDN10P78369 228 aa25.07■■□□□ 1.6
LSM4-204ENST00000594828 TNK2Q07912 1038 aa25.07■■□□□ 1.6
LSM4-204ENST00000594828 TDRD10Q5VZ19 366 aaKnown RBP25.07■■□□□ 1.6
LSM4-204ENST00000594828 IER2Q9BTL4 223 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms