RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 VPS37CA5D8V6 355 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 GOLGA8IPA6NC78 632 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 GOLGA8JA6NMD2 632 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 FOXD2O60548 495 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 GCNT3O95395 438 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 EGFP01133 1207 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 ACAT1P24752 427 aaKnown RBP17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 PXNP49023 591 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 GALK1P51570 392 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 RBP5P82980 135 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 BFSP1Q12934 665 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 ALCAMQ13740 583 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 PDGFRLQ15198 375 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 SOWAHAQ2M3V2 549 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 CFAP221Q4G0U5 840 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 NAIF1Q69YI7 327 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 FAM171BQ6P995 826 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 CEP68Q76N32 757 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 TOP6BLQ8N6T0 577 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 LOXL4Q96JB6 756 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 SLC22A12Q96S37 553 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 POLR3BQ9NW08 1133 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 GCNT4Q9P109 453 aa17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 UXTQ9UBK9 157 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 MAGED2Q9UNF1 606 aaPredicted RBP17.08■□□□□ 0.32
GTF2F1-203ENST00000594213 TM4SF5O14894 197 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 HCRTO43612 131 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 ATG13O75143 517 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 PDCP20941 246 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 GJA4P35212 333 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 LHX1P48742 406 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 MYL7Q01449 175 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 FAM160A1Q05DH4 1040 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 ZNF77Q15935 545 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 EZH1Q92800 747 aaPredicted RBP17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 FUBP3Q96I24 572 aaKnown RBP eCLIP17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 CYP2S1Q96SQ9 504 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 TMEM206Q9H813 350 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 SNX9Q9Y5X1 595 aa17.07■□□□□ 0.32
GTF2F1-203ENST00000594213 KIF26AQ9ULI4 1882 aaPredicted RBP17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 RNF40O75150 1001 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 RPP40O75818 363 aaKnown RBP17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 ZNF806P0C7X5 589 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 IDEP14735 1019 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 SYT1P21579 422 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 DRD1P21728 446 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 PCSK1P29120 753 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 MAGEA11P43364 429 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 AMPD2Q01433 879 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 USP4Q13107 963 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 MTF1Q14872 753 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 SLC39A14Q15043 492 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 PPM1JQ5JR12 505 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 CC2D1AQ6P1N0 951 aaPredicted RBP17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 CCDC73Q6ZRK6 1079 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 DPH6Q7L8W6 267 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 CACNA2D4Q7Z3S7 1137 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 KBTBD6Q86V97 674 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 ADGRF2Q8IZF7 708 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 SYCP3Q8IZU3 236 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 CAMKK1Q8N5S9 505 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 OR5B17Q8NGF7 314 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 OSCP1Q8WVF1 389 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 KBTBD7Q8WVZ9 684 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 ZC3H10Q96K80 434 aaKnown RBP17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 MTMR12Q9C0I1 747 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 PCIF1Q9H4Z3 704 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 ECT2Q9H8V3 914 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 PANK4Q9NVE7 773 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 INTS13Q9NVM9 706 aa17.06■□□□□ 0.32
GTF2F1-203ENST00000594213 PTPRJQ12913 1337 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 AXIN1O15169 862 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 ATP2C2O75185 946 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 AKAP3O75969 853 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 EPN2O95208 641 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 TCF3P15923 654 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 LMO2P25791 158 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 HOXD13P35453 343 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 TXLNAP40222 546 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 LIMK1P53667 647 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 CEBPZQ03701 1054 aaKnown RBP17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 EML3Q32P44 896 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 FBXO43Q4G163 708 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 PLA2G2CQ5R387 149 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 GPD1LQ8N335 351 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 GLIS3Q8NEA6 775 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 USP28Q96RU2 1077 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 P2RY13Q9BPV8 354 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 ARRDC1-AS1Q9H2J1 176 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 SLC8A2Q9UPR5 921 aa17.05■□□□□ 0.32
GTF2F1-203ENST00000594213 KIAA0391O15091 583 aaKnown RBP17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 KRT19P08727 400 aa17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 USP17L7P0C7H9 530 aa17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 STAT6P42226 847 aa17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 SF3A2Q15428 464 aaKnown RBP17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 LMBRD2Q68DH5 695 aaPredicted RBP17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 SPATA2LQ8IUW3 424 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms