RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SLITRK6Q9H5Y7 841 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 ARHGEF3Q9NR81 526 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 MAGEC2Q9UBF1 373 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 MAN1B1Q9UKM7 699 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 CACNA1HO95180 2353 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 ASS1P00966 412 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 HLA-DRAP01903 254 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 CSH1P0DML2 217 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 CSH2P0DML3 217 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 PTPN1P18031 435 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 AOC1P19801 751 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 BMP6P22004 513 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 BDNFP23560 247 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 CDC25CP30307 473 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 GCLMP48507 274 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 CYP4F8P98187 520 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 GRM2Q14416 872 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 MAPRE1Q15691 268 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 TAF12Q16514 161 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 SLC44A4Q53GD3 710 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 GPR158Q5T848 1215 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 ISM2Q6H9L7 571 aa19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 ARID3BQ8IVW6 561 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 GTPBP4Q9BZE4 634 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-202ENST00000593764 A8MXQ7 604 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 CETN3O15182 167 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 NOL4O94818 638 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 KRT13P13646 458 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 CD44P16070 742 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 RAP1GAPP47736 663 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 NLRP12P59046 1061 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 STARD6P59095 220 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 PFKPQ01813 784 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 MDH1BQ5I0G3 518 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 SPOPLQ6IQ16 392 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 PHLDB3Q6NSJ2 640 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 VSTM1Q6UX27 236 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 GPIHBP1Q8IV16 184 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 MFSD6LQ8IWD5 586 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 TAS1R2Q8TE23 839 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 TAF4BQ92750 862 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 MYRFLQ96LU7 910 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 LRRC3BQ96PB8 259 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 SLC46A2Q9BY10 475 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 TASP1Q9H6P5 420 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 TBC1D17Q9HA65 648 aa19.73■□□□□ 0.75
SHKBP1-202ENST00000593764 TRIM49BA6NDI0 452 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 SLC38A8A6NNN8 435 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 HEPACAM2A8MVW5 462 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 LRRN2O75325 713 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 PSMC3P17980 439 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 WEE1P30291 646 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 PLA2G5P39877 138 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 CYP27A1Q02318 531 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 TCF15Q12870 199 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 ARHGAP15Q53QZ3 475 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 SCARA5Q6ZMJ2 495 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 SCN4BQ8IWT1 228 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 B3GALNT2Q8NCR0 500 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 TRMT2BQ96GJ1 504 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 PRRX2Q99811 253 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 TRMT61BQ9BVS5 477 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 TMEM8AQ9HCN3 771 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 TMEM30AQ9NV96 361 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 MAGED2Q9UNF1 606 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 PTPRDP23468 1912 aa19.72■□□□□ 0.75
SHKBP1-202ENST00000593764 F5P12259 2224 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 STK25O00506 426 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 TADA3O75528 432 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 GTF2H1P32780 548 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 ANP32AP39687 249 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 PIK3CAP42336 1068 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 ASPAP45381 313 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 NUBP1P53384 320 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 UBE2HP62256 183 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 FKBP3Q00688 224 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 MLF2Q15773 248 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 DEPDC1BQ8WUY9 529 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 E2F7Q96AV8 911 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 SPATA17Q96L03 361 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 TSG101Q99816 390 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 DDX23Q9BUQ8 820 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 B3GNT5Q9BYG0 378 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 APOBEC3GQ9HC16 384 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 COL4A3Q01955 1670 aa19.71■□□□□ 0.75
SHKBP1-202ENST00000593764 DENND4CQ5VZ89 1909 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 SHISA7A6NL88 538 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 PPP1R3GB7ZBB8 358 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 CLDN5O00501 218 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 GALR2O43603 387 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 PRAMEF12O95522 483 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 EPB41P11171 864 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 P4HA1P13674 534 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 CCNE1P24864 410 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 GDI1P31150 447 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 GRIK1P39086 918 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 CACNA2D1P54289 1103 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 PRKCQQ04759 706 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 LRRC63Q05C16 580 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms