RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 PDGFRBP09619 1106 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 CSH1P0DML2 217 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 CSH2P0DML3 217 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 TARSP26639 723 aaKnown RBP18.95■□□□□ 0.62
CIRBP-244ENST00000593283 NLRP12P59046 1061 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 WDR72Q3MJ13 1102 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 FAM171BQ6P995 826 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 YAF2Q8IY57 180 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 TMEM174Q8WUU8 243 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 SNX25Q9H3E2 840 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 NME7Q9Y5B8 376 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 MYH10P35580 1976 aa18.95■□□□□ 0.62
CIRBP-244ENST00000593283 FAM170BA6NMN3 283 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 SLC38A8A6NNN8 435 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 ARNTLO00327 626 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 DPYSL4O14531 572 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 TADA3O75528 432 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 NOL4O94818 638 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 CLSTN1O94985 981 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 STAU1O95793 577 aaKnown RBP18.94■□□□□ 0.62
CIRBP-244ENST00000593283 NBL1P41271 181 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 MAGEA11P43364 429 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 CLDN10P78369 228 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 NUCB2P80303 420 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 KCNB1Q14721 858 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 ZNF852Q6ZMS4 543 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 C4orf50Q6ZRC1 276 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 FRMD5Q7Z6J6 570 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 SCN4BQ8IWT1 228 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 SYAP1Q96A49 352 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-244ENST00000593283 LRRC3BQ96PB8 259 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 SMG9Q9H0W8 520 aaKnown RBP18.94■□□□□ 0.62
CIRBP-244ENST00000593283 SMYD3Q9H7B4 428 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 NXF1Q9UBU9 619 aaKnown RBP18.94■□□□□ 0.62
CIRBP-244ENST00000593283 MAPK8IP1Q9UQF2 711 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 PIAS3Q9Y6X2 628 aa18.94■□□□□ 0.62
CIRBP-244ENST00000593283 CALUO43852 315 aaPredicted RBP18.93■□□□□ 0.62
CIRBP-244ENST00000593283 TACC1O75410 805 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 KIF20AO95235 890 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 F11P03951 625 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 ATICP31939 592 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 AP3M2P53677 418 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 DLG4P78352 724 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 CYP27A1Q02318 531 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 FCHO2Q0JRZ9 810 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 NCOA4Q13772 614 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 MAPRE1Q15691 268 aaKnown RBP18.93■□□□□ 0.62
CIRBP-244ENST00000593283 ZNF699Q32M78 642 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 MDH1BQ5I0G3 518 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 SCARA5Q6ZMJ2 495 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 OR6B3Q8NGW1 331 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 ELMO3Q96BJ8 720 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 SLC46A2Q9BY10 475 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 BCO2Q9BYV7 579 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 OSBPL6Q9BZF3 934 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 DPEP3Q9H4B8 488 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 TRPV5Q9NQA5 729 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 OBP2AQ9NY56 170 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 TRAF3IP3Q9Y228 551 aa18.93■□□□□ 0.62
CIRBP-244ENST00000593283 CHADO15335 359 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 VNN1O95497 513 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 BDNFP23560 247 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 WEE1P30291 646 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 GNL1P36915 607 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-244ENST00000593283 C1orf210Q8IVY1 113 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 CMTM8Q8IZV2 173 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 FMR1NBQ8N0W7 255 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-244ENST00000593283 GUF1Q8N442 669 aaKnown RBP18.92■□□□□ 0.62
CIRBP-244ENST00000593283 MAB21L3Q8N8X9 362 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 TMC2Q8TDI7 906 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 MRPS31Q92665 395 aaKnown RBP18.92■□□□□ 0.62
CIRBP-244ENST00000593283 TRMT2BQ96GJ1 504 aaKnown RBP18.92■□□□□ 0.62
CIRBP-244ENST00000593283 PCED1BQ96HM7 432 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 ZFYVE19Q96K21 471 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 MAGEC2Q9UBF1 373 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-244ENST00000593283 UXTQ9UBK9 157 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-244ENST00000593283 NDRG2Q9UN36 371 aaKnown RBP18.92■□□□□ 0.62
CIRBP-244ENST00000593283 FRMD4BQ9Y2L6 1034 aa18.92■□□□□ 0.62
CIRBP-244ENST00000593283 MRPS17Q9Y2R5 130 aaKnown RBP18.92■□□□□ 0.62
CIRBP-244ENST00000593283 PTPRZ1P23471 2315 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-244ENST00000593283 PROB1E7EW31 1015 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 GFRA3O60609 400 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 C4BPAP04003 597 aaKnown RBP18.91■□□□□ 0.62
CIRBP-244ENST00000593283 NR2F2P24468 414 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 DDX6P26196 483 aaKnown RBP eCLIP18.91■□□□□ 0.626e-15■■□□□ 11.4
CIRBP-244ENST00000593283 RAP1GAPP47736 663 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 PNOCQ13519 176 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 ZACNQ401N2 412 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 ZNF667Q5HYK9 610 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 TXNDC8Q6A555 127 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 SMYD4Q8IYR2 804 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-244ENST00000593283 MYCBPAPQ8TBZ2 947 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 BPIFB1Q8TDL5 484 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 CSGALNACT1Q8TDX6 532 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 CCDC34Q96HJ3 373 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 MYRFLQ96LU7 910 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 VRTNQ9H8Y1 702 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 SPATA6Q9NWH7 488 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-244ENST00000593283 ZMYM5Q9UJ78 669 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms