RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 HOXC13P31276 330 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 LHX1P48742 406 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 SPEM2Q0P670 501 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 MYO1EQ12965 1108 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 RUNX3Q13761 415 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 SOWAHAQ2M3V2 549 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 MON1AQ86VX9 555 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 CBWD2Q8IUF1 395 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 LRRC27Q9C0I9 530 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 KIF9Q9HAQ2 790 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 UXTQ9UBK9 157 aaPredicted RBP21.96■■□□□ 1.11
TRIM47-207ENST00000593089 ZNF233A6NK53 670 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 GABRDO14764 452 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 HRO43593 1189 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 TADA3O75528 432 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 NOL4O94818 638 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 TNNC2P02585 160 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 TGM1P22735 817 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 PCSK1P29120 753 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 LMNB2Q03252 620 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 E2F4Q16254 413 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 CC2D1AQ6P1N0 951 aaPredicted RBP21.95■■□□□ 1.1
TRIM47-207ENST00000593089 LONP2Q86WA8 852 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 SCN4BQ8IWT1 228 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 SYNPOQ8N3V7 929 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 TTC16Q8NEE8 873 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 RIN3Q8TB24 985 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 SPATA18Q8TC71 538 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 DHX58Q96C10 678 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 HPDLQ96IR7 371 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 TRIM9Q9C026 710 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 TRPC7Q9HCX4 862 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 KBTBD4Q9NVX7 518 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 HSPBP1Q9NZL4 362 aa21.95■■□□□ 1.1
TRIM47-207ENST00000593089 OTOL1A6NHN0 477 aaPredicted RBP21.94■■□□□ 1.1
TRIM47-207ENST00000593089 PPP6R2O75170 966 aa21.94■■□□□ 1.1
TRIM47-207ENST00000593089 ARSAP15289 507 aa21.94■■□□□ 1.1
TRIM47-207ENST00000593089 HOXD13P35453 343 aa21.94■■□□□ 1.1
TRIM47-207ENST00000593089 ASIC1P78348 528 aa21.94■■□□□ 1.1
TRIM47-207ENST00000593089 SURF1Q15526 300 aa21.94■■□□□ 1.1
TRIM47-207ENST00000593089 CFAP221Q4G0U5 840 aa21.94■■□□□ 1.1
TRIM47-207ENST00000593089 TRMT2BQ96GJ1 504 aaKnown RBP21.94■■□□□ 1.1
TRIM47-207ENST00000593089 ZNF396Q96N95 335 aaPredicted RBP21.94■■□□□ 1.1
TRIM47-207ENST00000593089 SOBPA7XYQ1 873 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 PRR5-ARHGAP8B1AHC4 643 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 ATP2C2O75185 946 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 SDHBP21912 280 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 LMO2P25791 158 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 CNR2P34972 360 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 PSMC1P62191 440 aaKnown RBP21.93■■□□□ 1.1
TRIM47-207ENST00000593089 ARHGAP8P85298 464 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 DUOXA2Q1HG44 320 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 FOXD4L5Q5VV16 416 aaPredicted RBP21.93■■□□□ 1.1
TRIM47-207ENST00000593089 FSTL4Q6MZW2 842 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 PKN3Q6P5Z2 889 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 DPH6Q7L8W6 267 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.93■■□□□ 1.1
TRIM47-207ENST00000593089 RDH13Q8NBN7 331 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 KBTBD7Q8WVZ9 684 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 FOXD4L4Q8WXT5 416 aaPredicted RBP21.93■■□□□ 1.1
TRIM47-207ENST00000593089 CHFRQ96EP1 664 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 FUBP3Q96I24 572 aaKnown RBP eCLIP21.93■■□□□ 1.1
TRIM47-207ENST00000593089 MYRFLQ96LU7 910 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 SYT15Q9BQS2 421 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 BACH2Q9BYV9 841 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 CUEDC2Q9H467 287 aa21.93■■□□□ 1.1
TRIM47-207ENST00000593089 CDV3Q9UKY7 258 aaKnown RBP21.93■■□□□ 1.1
TRIM47-207ENST00000593089 EIF3DO15371 548 aaKnown RBP eCLIP21.92■■□□□ 1.1
TRIM47-207ENST00000593089 RETP07949 1114 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 ATXN1P54253 815 aaKnown RBP21.92■■□□□ 1.1
TRIM47-207ENST00000593089 AMPD3Q01432 767 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 GRSF1Q12849 480 aaKnown RBP eCLIP21.92■■□□□ 1.1
TRIM47-207ENST00000593089 ZNF268Q14587 947 aaPredicted RBP21.92■■□□□ 1.1
TRIM47-207ENST00000593089 TMEM196Q5HYL7 178 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 FAM171BQ6P995 826 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 SHC4Q6S5L8 630 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 C4orf50Q6ZRC1 276 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 WDR49Q8IV35 697 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 MYLPFQ96A32 169 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 SLC22A12Q96S37 553 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 CYP2S1Q96SQ9 504 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 MAGEC2Q9UBF1 373 aaPredicted RBP21.92■■□□□ 1.1
TRIM47-207ENST00000593089 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.92■■□□□ 1.1
TRIM47-207ENST00000593089 ANAPC1Q9H1A4 1944 aa21.92■■□□□ 1.1
TRIM47-207ENST00000593089 ATG2BQ96BY7 2078 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 GREB1Q4ZG55 1949 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 TRAV19A0A0A6YYK7 116 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 CUTAO60888 179 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 CKMP06732 381 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 FAM160A1Q05DH4 1040 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 MTF1Q14872 753 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 PDGFRLQ15198 375 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 FAM26FQ5R3K3 315 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 CEP68Q76N32 757 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 EPM2AIP1Q7L775 607 aaPredicted RBP21.91■■□□□ 1.1
TRIM47-207ENST00000593089 IQUBQ8NA54 791 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 ZNF507Q8TCN5 953 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 MMS19Q96T76 1030 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 KIAA1586Q9HCI6 787 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 CRTAC1Q9NQ79 661 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms