RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TMEM174Q8WUU8 243 aa14.85□□□□□ -0.03
APOC1-208ENST00000592535 IRF7Q92985 503 aa14.85□□□□□ -0.03
APOC1-208ENST00000592535 MYLPFQ96A32 169 aa14.85□□□□□ -0.03
APOC1-208ENST00000592535 LRRC3BQ96PB8 259 aa14.85□□□□□ -0.03
APOC1-208ENST00000592535 SLC46A2Q9BY10 475 aa14.85□□□□□ -0.03
APOC1-208ENST00000592535 XYLT2Q9H1B5 865 aa14.85□□□□□ -0.03
APOC1-208ENST00000592535 MAPK8IP1Q9UQF2 711 aa14.85□□□□□ -0.03
APOC1-208ENST00000592535 CACNA1IQ9P0X4 2223 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 PIEZO1Q92508 2521 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 FAM170BA6NMN3 283 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 SLC38A8A6NNN8 435 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 ARNTLO00327 626 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 CALUO43852 315 aaPredicted RBP14.84□□□□□ -0.03
APOC1-208ENST00000592535 TACC1O75410 805 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 C4BPAP04003 597 aaKnown RBP14.84□□□□□ -0.03
APOC1-208ENST00000592535 ATICP31939 592 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 CLDN10P78369 228 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 KCNB1Q14721 858 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 CEP135Q66GS9 1140 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 C4orf50Q6ZRC1 276 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 YAF2Q8IY57 180 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 OR6B3Q8NGW1 331 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 SYAP1Q96A49 352 aaPredicted RBP14.84□□□□□ -0.03
APOC1-208ENST00000592535 ELMO3Q96BJ8 720 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 FUBP3Q96I24 572 aaKnown RBP eCLIP14.84□□□□□ -0.03
APOC1-208ENST00000592535 OSBPL6Q9BZF3 934 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 SMG9Q9H0W8 520 aaKnown RBP14.84□□□□□ -0.03
APOC1-208ENST00000592535 SNX25Q9H3E2 840 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 TRPV5Q9NQA5 729 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 MAGEC2Q9UBF1 373 aaPredicted RBP14.84□□□□□ -0.03
APOC1-208ENST00000592535 NXF1Q9UBU9 619 aaKnown RBP14.84□□□□□ -0.03
APOC1-208ENST00000592535 TRAF3IP3Q9Y228 551 aa14.84□□□□□ -0.03
APOC1-208ENST00000592535 F5P12259 2224 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 DPYSL4O14531 572 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 CHADO15335 359 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 TADA3O75528 432 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 NOL4O94818 638 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 KIF20AO95235 890 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 VNN1O95497 513 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 FAM163BP0C2L3 166 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 BDNFP23560 247 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 WEE1P30291 646 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 GNL1P36915 607 aaPredicted RBP14.83□□□□□ -0.04
APOC1-208ENST00000592535 NBL1P41271 181 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 MAGEA11P43364 429 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 AP3M2P53677 418 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 FCHO2Q0JRZ9 810 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 ZNF852Q6ZMS4 543 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 FRMD5Q7Z6J6 570 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 FMR1NBQ8N0W7 255 aaPredicted RBP14.83□□□□□ -0.04
APOC1-208ENST00000592535 PCED1BQ96HM7 432 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 ZFYVE19Q96K21 471 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 BCO2Q9BYV7 579 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 DPEP3Q9H4B8 488 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 OBP2AQ9NY56 170 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 PIAS3Q9Y6X2 628 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 FANCMQ8IYD8 2048 aa14.83□□□□□ -0.04
APOC1-208ENST00000592535 CLSTN1O94985 981 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 NR2F2P24468 414 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 CYP27A1Q02318 531 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 FZD5Q13467 585 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 PNOCQ13519 176 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 NCOA4Q13772 614 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 MAPRE1Q15691 268 aaKnown RBP14.82□□□□□ -0.04
APOC1-208ENST00000592535 ZNF699Q32M78 642 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 ZNF667Q5HYK9 610 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 MDH1BQ5I0G3 518 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 C1orf220Q5T0J3 134 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 TXNDC8Q6A555 127 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 C1orf210Q8IVY1 113 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 CMTM8Q8IZV2 173 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 GUF1Q8N442 669 aaKnown RBP14.82□□□□□ -0.04
APOC1-208ENST00000592535 MAB21L3Q8N8X9 362 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 MYCBPAPQ8TBZ2 947 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 TMC2Q8TDI7 906 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 BPIFB1Q8TDL5 484 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 MRPS31Q92665 395 aaKnown RBP14.82□□□□□ -0.04
APOC1-208ENST00000592535 TRMT2BQ96GJ1 504 aaKnown RBP14.82□□□□□ -0.04
APOC1-208ENST00000592535 MYRFLQ96LU7 910 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 NELL2Q99435 816 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 SMYD3Q9H7B4 428 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 VRTNQ9H8Y1 702 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 UXTQ9UBK9 157 aaPredicted RBP14.82□□□□□ -0.04
APOC1-208ENST00000592535 NDRG2Q9UN36 371 aaKnown RBP14.82□□□□□ -0.04
APOC1-208ENST00000592535 FRMD4BQ9Y2L6 1034 aa14.82□□□□□ -0.04
APOC1-208ENST00000592535 MRPS17Q9Y2R5 130 aaKnown RBP14.82□□□□□ -0.04
APOC1-208ENST00000592535 HELZP42694 1942 aaKnown RBP14.82□□□□□ -0.04
APOC1-208ENST00000592535 GOLGA6L4A6NEF3 574 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 A8MXQ7 604 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 PROB1E7EW31 1015 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 MAN2B1O00754 1011 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 GFRA3O60609 400 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 AKAP3O75969 853 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 PTPN1P18031 435 aaKnown RBP14.81□□□□□ -0.04
APOC1-208ENST00000592535 DDX6P26196 483 aaKnown RBP eCLIP14.81□□□□□ -0.04
APOC1-208ENST00000592535 GRIK1P39086 918 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 RAP1GAPP47736 663 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 CDH8P55286 799 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 NFIL3Q16649 462 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 ZACNQ401N2 412 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms