RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 MAGEA11P43364 429 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 AP3M2P53677 418 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 NLRP12P59046 1061 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 FCHO2Q0JRZ9 810 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 ZACNQ401N2 412 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 GPIHBP1Q8IV16 184 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 ZNF687Q8N1G0 1237 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 SPATA20Q8TB22 786 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 MYLPFQ96A32 169 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 ELMO3Q96BJ8 720 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 SHDQ96IW2 340 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 MYRFLQ96LU7 910 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 SLC46A2Q9BY10 475 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 SLITRK6Q9H5Y7 841 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 TASP1Q9H6P5 420 aa21.58■■□□□ 1.05
CIRBP-239ENST00000592467 STK25O00506 426 aa21.57■■□□□ 1.04
CIRBP-239ENST00000592467 CSH1P0DML2 217 aa21.57■■□□□ 1.04
CIRBP-239ENST00000592467 CSH2P0DML3 217 aa21.57■■□□□ 1.04
CIRBP-239ENST00000592467 CD72P21854 359 aa21.57■■□□□ 1.04
CIRBP-239ENST00000592467 FZD5Q13467 585 aa21.57■■□□□ 1.04
CIRBP-239ENST00000592467 ALYREFQ86V81 257 aaKnown RBP21.57■■□□□ 1.04
CIRBP-239ENST00000592467 SPATA2LQ8IUW3 424 aaPredicted RBP21.57■■□□□ 1.04
CIRBP-239ENST00000592467 SMYD4Q8IYR2 804 aaPredicted RBP21.57■■□□□ 1.04
CIRBP-239ENST00000592467 CCDC47Q96A33 483 aaKnown RBP21.57■■□□□ 1.04
CIRBP-239ENST00000592467 SYAP1Q96A49 352 aaPredicted RBP21.57■■□□□ 1.04
CIRBP-239ENST00000592467 E2F7Q96AV8 911 aa21.57■■□□□ 1.04
CIRBP-239ENST00000592467 TRMT2BQ96GJ1 504 aaKnown RBP21.57■■□□□ 1.04
CIRBP-239ENST00000592467 DPEP3Q9H4B8 488 aa21.57■■□□□ 1.04
CIRBP-239ENST00000592467 ZNF638Q14966 1978 aaKnown RBP21.56■■□□□ 1.04
CIRBP-239ENST00000592467 SLC38A8A6NNN8 435 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 KIF20AO95235 890 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 NR2F2P24468 414 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 GDI1P31150 447 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 GNL1P36915 607 aaPredicted RBP21.56■■□□□ 1.04
CIRBP-239ENST00000592467 RPL10AP62906 217 aaKnown RBP21.56■■□□□ 1.04
CIRBP-239ENST00000592467 FAM160A1Q05DH4 1040 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 TRPC3Q13507 836 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 NCOA4Q13772 614 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 CEP135Q66GS9 1140 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 TPRG1Q6ZUI0 275 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 SV2AQ7L0J3 742 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 MYCBPAPQ8TBZ2 947 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 PCED1BQ96HM7 432 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 OSBPL6Q9BZF3 934 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 SDCBP2Q9H190 292 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 SMYD3Q9H7B4 428 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 BRD9Q9H8M2 597 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 LTB4R2Q9NPC1 389 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 TMEM30AQ9NV96 361 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 OBP2AQ9NY56 170 aa21.56■■□□□ 1.04
CIRBP-239ENST00000592467 NXF1Q9UBU9 619 aaKnown RBP21.56■■□□□ 1.04
CIRBP-239ENST00000592467 IKBKBO14920 756 aa21.55■■□□□ 1.04
CIRBP-239ENST00000592467 MRE11P49959 708 aa21.55■■□□□ 1.04
CIRBP-239ENST00000592467 TNNC1P63316 161 aa21.55■■□□□ 1.04
CIRBP-239ENST00000592467 BIRC3Q13489 604 aa21.55■■□□□ 1.04
CIRBP-239ENST00000592467 ARHGAP15Q53QZ3 475 aa21.55■■□□□ 1.04
CIRBP-239ENST00000592467 C4orf50Q6ZRC1 276 aa21.55■■□□□ 1.04
CIRBP-239ENST00000592467 IRF7Q92985 503 aa21.55■■□□□ 1.04
CIRBP-239ENST00000592467 IRF2BPLQ9H1B7 796 aa21.55■■□□□ 1.04
CIRBP-239ENST00000592467 MAGEC2Q9UBF1 373 aaPredicted RBP21.55■■□□□ 1.04
CIRBP-239ENST00000592467 F5P12259 2224 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 PHACTR2O75167 634 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 BDNFP23560 247 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 TARSP26639 723 aaKnown RBP21.54■■□□□ 1.04
CIRBP-239ENST00000592467 VAMP7P51809 220 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 CACNA2D1P54289 1103 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 CDH8P55286 799 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 ANGPT1Q15389 498 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 MAPRE1Q15691 268 aaKnown RBP21.54■■□□□ 1.04
CIRBP-239ENST00000592467 ZNF699Q32M78 642 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 COBLL1Q53SF7 1204 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 MDH1BQ5I0G3 518 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 VSTM1Q6UX27 236 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 OR6B3Q8NGW1 331 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 RIN3Q8TB24 985 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 ATOH1Q92858 354 aaPredicted RBP21.54■■□□□ 1.04
CIRBP-239ENST00000592467 ERCC4Q92889 916 aaPredicted RBP21.54■■□□□ 1.04
CIRBP-239ENST00000592467 SPATA17Q96L03 361 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 TIGD1Q96MW7 591 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 SMG9Q9H0W8 520 aaKnown RBP21.54■■□□□ 1.04
CIRBP-239ENST00000592467 SNX25Q9H3E2 840 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 MAGED2Q9UNF1 606 aaPredicted RBP21.54■■□□□ 1.04
CIRBP-239ENST00000592467 FRMD4BQ9Y2L6 1034 aa21.54■■□□□ 1.04
CIRBP-239ENST00000592467 CACNA1IQ9P0X4 2223 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 FAM170BA6NMN3 283 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 PROB1E7EW31 1015 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 ZNF263O14978 683 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 CHADO15335 359 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 PTPN1P18031 435 aaKnown RBP21.53■■□□□ 1.04
CIRBP-239ENST00000592467 RFX1P22670 979 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 PRCPP42785 496 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 RAP1GAPP47736 663 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 ENPEPQ07075 957 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 PPP3CAQ08209 521 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 TAF12Q16514 161 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 EDRF1Q3B7T1 1238 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 TXNDC8Q6A555 127 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 SCN4BQ8IWT1 228 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 MAML2Q8IZL2 1156 aaPredicted RBP21.53■■□□□ 1.04
CIRBP-239ENST00000592467 CMTM8Q8IZV2 173 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms