RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 PRPF6O94906 941 aaKnown RBP16.9■□□□□ 0.3
CIRBP-230ENST00000591055 TMEM191BP0C7N4 346 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 HOXC13P31276 330 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 LHX1P48742 406 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 AMPD2Q01433 879 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 ZNF268Q14587 947 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-230ENST00000591055 TMEM196Q5HYL7 178 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 SCARA3Q6AZY7 606 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 FSTL4Q6MZW2 842 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 OSTM1Q86WC4 334 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 CCDC65Q8IXS2 484 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 ADGRF2Q8IZF7 708 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 TOP6BLQ8N6T0 577 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 CXorf38Q8TB03 319 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 SPATA18Q8TC71 538 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 NETO1Q8TDF5 533 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 TRMT2BQ96GJ1 504 aaKnown RBP16.9■□□□□ 0.3
CIRBP-230ENST00000591055 USP28Q96RU2 1077 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 PKMYT1Q99640 499 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 MTMR12Q9C0I1 747 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 SIX4Q9UIU6 781 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 MORC2Q9Y6X9 1032 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-230ENST00000591055 CACNA1BQ00975 2339 aa16.9■□□□□ 0.3
CIRBP-230ENST00000591055 A0A087X0B3 334 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 OTOL1A6NHN0 477 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-230ENST00000591055 ATG13O75143 517 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 ARSAP15289 507 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 PCSK1P29120 753 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 SLC39A14Q15043 492 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 PDGFRLQ15198 375 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 CSRP2Q16527 193 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 PKN3Q6P5Z2 889 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 PRR23CQ6ZRP0 262 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 SPATA2LQ8IUW3 424 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-230ENST00000591055 SCN4BQ8IWT1 228 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 GPD1LQ8N335 351 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 FAM160A2Q8N612 972 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-230ENST00000591055 PDILTQ8N807 584 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 ANKRD36BP1Q96IX9 119 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 MYRFLQ96LU7 910 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 TRPC7Q9HCX4 862 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 SLC8A2Q9UPR5 921 aa16.89■□□□□ 0.29
CIRBP-230ENST00000591055 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-230ENST00000591055 GABRDO14764 452 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 SLC30A4O14863 429 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 KIAA0391O15091 583 aaKnown RBP16.88■□□□□ 0.29
CIRBP-230ENST00000591055 TADA3O75528 432 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 MYO1EQ12965 1108 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 MTF1Q14872 753 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 CCDC142Q17RM4 750 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 CFAP221Q4G0U5 840 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 LMBRD2Q68DH5 695 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-230ENST00000591055 STXBP4Q6ZWJ1 553 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 RIN3Q8TB24 985 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 EXOC4Q96A65 974 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 CHFRQ96EP1 664 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 FUBP3Q96I24 572 aaKnown RBP eCLIP16.88■□□□□ 0.29
CIRBP-230ENST00000591055 INTS13Q9NVM9 706 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 MTMR6Q9Y217 621 aa16.88■□□□□ 0.29
CIRBP-230ENST00000591055 TRAV19A0A0A6YYK7 116 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 ZNF233A6NK53 670 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 HCRTO43612 131 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 FOXD2O60548 495 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-230ENST00000591055 EGFP01133 1207 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 TNNC2P02585 160 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 CKMP06732 381 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 USP17L7P0C7H9 530 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 DRD1P21728 446 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 PXNP49023 591 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-230ENST00000591055 GALK1P51570 392 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 FAM160A1Q05DH4 1040 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 SURF1Q15526 300 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 SOWAHAQ2M3V2 549 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 C4orf50Q6ZRC1 276 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 DPH6Q7L8W6 267 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 CPA6Q8N4T0 437 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 TTC16Q8NEE8 873 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 OR5B17Q8NGF7 314 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 GAB3Q8WWW8 586 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 HPDLQ96IR7 371 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 P2RY13Q9BPV8 354 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 ZSCAN16Q9H4T2 348 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-230ENST00000591055 DUS2Q9NX74 493 aaKnown RBP16.87■□□□□ 0.29
CIRBP-230ENST00000591055 CHD8Q9HCK8 2581 aa16.87■□□□□ 0.29
CIRBP-230ENST00000591055 CCDC163A0A0D9SF12 145 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 AXIN1O15169 862 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 RNF40O75150 1001 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 RPP40O75818 363 aaKnown RBP16.86■□□□□ 0.29
CIRBP-230ENST00000591055 GJA4P35212 333 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 MAGEA11P43364 429 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 IFNAR2P48551 515 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 STK38Q15208 465 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 ZNF77Q15935 545 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 DUOXA2Q1HG44 320 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 FAM171BQ6P995 826 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 CACNA2D4Q7Z3S7 1137 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 CBWD2Q8IUF1 395 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 FSIP1Q8NA03 581 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 GLIS3Q8NEA6 775 aa16.86■□□□□ 0.29
CIRBP-230ENST00000591055 OSCP1Q8WVF1 389 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms