RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 SREBF2Q12772 1141 aa8.22□□□□□ -1.09
NPC1-209ENST00000590723 TRIM25Q14258 630 aaKnown RBP8.22□□□□□ -1.09
NPC1-209ENST00000590723 MVPQ14764 893 aaKnown RBP8.22□□□□□ -1.09
NPC1-209ENST00000590723 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.22□□□□□ -1.09
NPC1-209ENST00000590723 HTR3DQ70Z44 454 aa8.22□□□□□ -1.09
NPC1-209ENST00000590723 PDZD4Q76G19 769 aaPredicted RBP8.22□□□□□ -1.09
NPC1-209ENST00000590723 SLC41A1Q8IVJ1 513 aa8.22□□□□□ -1.09
NPC1-209ENST00000590723 AFAP1L2Q8N4X5 818 aa8.22□□□□□ -1.09
NPC1-209ENST00000590723 ZKSCAN4Q969J2 545 aaPredicted RBP8.22□□□□□ -1.09
NPC1-209ENST00000590723 NEUROD6Q96NK8 337 aa8.22□□□□□ -1.09
NPC1-209ENST00000590723 MNTQ99583 582 aa8.22□□□□□ -1.09
NPC1-209ENST00000590723 CPPED1Q9BRF8 314 aaPredicted RBP8.22□□□□□ -1.09
NPC1-209ENST00000590723 ENKD1Q9H0I2 346 aa8.22□□□□□ -1.09
NPC1-209ENST00000590723 GNL3LQ9NVN8 582 aaKnown RBP8.22□□□□□ -1.09
NPC1-209ENST00000590723 ABCF2Q9UG63 623 aa8.22□□□□□ -1.09
NPC1-209ENST00000590723 DBNLQ9UJU6 430 aaKnown RBP8.22□□□□□ -1.09
NPC1-209ENST00000590723 NOP58Q9Y2X3 529 aaKnown RBP8.22□□□□□ -1.09
NPC1-209ENST00000590723 MROH7-TTC4A0A0A0MT08 1334 aa8.22□□□□□ -1.09
NPC1-209ENST00000590723 COL2A1P02458 1487 aaPredicted RBP8.21□□□□□ -1.09
NPC1-209ENST00000590723 PHF2O75151 1096 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 GASTP01350 101 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 LPLP06858 475 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 CASRP41180 1078 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 BTDP43251 543 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 RABGGTBP53611 331 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 RHBDL3P58872 404 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 G3BP1Q13283 466 aaKnown RBP eCLIP8.21□□□□□ -1.1
NPC1-209ENST00000590723 MRPL49Q13405 166 aaKnown RBP8.21□□□□□ -1.1
NPC1-209ENST00000590723 PDCD1Q15116 288 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 UBE3CQ15386 1083 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 C20orf194Q5TEA3 1177 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 NAIF1Q69YI7 327 aaPredicted RBP8.21□□□□□ -1.1
NPC1-209ENST00000590723 MIGA2Q7L4E1 593 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 STRA8Q7Z7C7 330 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 ADGRA1Q86SQ6 560 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 LYSMD2Q8IV50 215 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 SPATA5Q8NB90 893 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 FAM151AQ8WW52 585 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 BRI3BPQ8WY22 251 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 NSUN4Q96CB9 384 aaKnown RBP8.21□□□□□ -1.1
NPC1-209ENST00000590723 EAF2Q96CJ1 260 aaPredicted RBP8.21□□□□□ -1.1
NPC1-209ENST00000590723 SCAND2PQ9GZW5 306 aaPredicted RBP8.21□□□□□ -1.1
NPC1-209ENST00000590723 GPR108Q9NPR9 543 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 TMOD2Q9NZR1 351 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 CEP72Q9P209 647 aa8.21□□□□□ -1.1
NPC1-209ENST00000590723 BRCA2P51587 3418 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 DDTLA6NHG4 134 aaPredicted RBP8.2□□□□□ -1.1
NPC1-209ENST00000590723 GOLGA8AA7E2F4 631 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 SURF6O75683 361 aaKnown RBP8.2□□□□□ -1.1
NPC1-209ENST00000590723 RECQL4O94761 1208 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 ADH4P08319 380 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 MRPS9P82933 396 aaKnown RBP8.2□□□□□ -1.1
NPC1-209ENST00000590723 STAT4Q14765 748 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 DOK3Q7L591 496 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 CTU1Q7Z7A3 348 aaKnown RBP8.2□□□□□ -1.1
NPC1-209ENST00000590723 DZIP1Q86YF9 867 aaKnown RBP8.2□□□□□ -1.1
NPC1-209ENST00000590723 FAM43AQ8N2R8 423 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 ZGPATQ8N5A5 531 aaKnown RBP8.2□□□□□ -1.1
NPC1-209ENST00000590723 ZNF483Q8TF39 744 aaPredicted RBP8.2□□□□□ -1.1
NPC1-209ENST00000590723 SNX33Q8WV41 574 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 AUTS2Q8WXX7 1259 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 IDI2Q9BXS1 227 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.2□□□□□ -1.1
NPC1-209ENST00000590723 ZNF112Q9UJU3 913 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 EXOC6BQ9Y2D4 811 aa8.2□□□□□ -1.1
NPC1-209ENST00000590723 REXO2Q9Y3B8 237 aaKnown RBP8.2□□□□□ -1.1
NPC1-209ENST00000590723 FRMPD3Q5JV73 1810 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 RLFQ13129 1914 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 GPR75-ASB3A0A0A6YYF3 556 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 DNAJC6O75061 913 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 PTGS2P35354 604 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 HMGA2P52926 109 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 TMPRSS15P98073 1019 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 DGCR2P98153 550 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 RNF219Q5W0B1 726 aaPredicted RBP8.19□□□□□ -1.1
NPC1-209ENST00000590723 SPATS2Q86XZ4 545 aaKnown RBP8.19□□□□□ -1.1
NPC1-209ENST00000590723 MSL3Q8N5Y2 521 aaKnown RBP8.19□□□□□ -1.1
NPC1-209ENST00000590723 CCDC8Q9H0W5 538 aaPredicted RBP8.19□□□□□ -1.1
NPC1-209ENST00000590723 PIH1D3Q9NQM4 214 aaKnown RBP8.19□□□□□ -1.1
NPC1-209ENST00000590723 ZBTB40Q9NUA8 1239 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 DPP7Q9UHL4 492 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 RPTORQ8N122 1335 aa8.19□□□□□ -1.1
NPC1-209ENST00000590723 COL11A1P12107 1806 aaPredicted RBP8.19□□□□□ -1.1
NPC1-209ENST00000590723 GREB1LQ9C091 1923 aaPredicted RBP8.19□□□□□ -1.1
NPC1-209ENST00000590723 CCL15-CCL14A0A0B4J2E2 113 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 NARSO43776 548 aaKnown RBP8.18□□□□□ -1.1
NPC1-209ENST00000590723 ENTPD3O75355 529 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 STC2O76061 302 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 INHBEP58166 350 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 APBA1Q02410 837 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 PPIL2Q13356 520 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 OS9Q13438 667 aaPredicted RBP8.18□□□□□ -1.1
NPC1-209ENST00000590723 PICALMQ13492 652 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 CCL15Q16663 113 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 RABL3Q5HYI8 236 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 TTC39AQ5SRH9 613 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 ERO1BQ86YB8 467 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 CD99L2Q8TCZ2 262 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 ZNF480Q8WV37 535 aa8.18□□□□□ -1.1
NPC1-209ENST00000590723 PGBD4Q96DM1 585 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms