RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 MAPK10P53779 464 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 CYP1B1Q16678 543 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 HSF5Q4G112 596 aaPredicted RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 FASTKD5Q7L8L6 764 aaKnown RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 SLC47A2Q86VL8 602 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 ATP11CQ8NB49 1132 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 DAGLBQ8NCG7 672 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 DEPTORQ8TB45 409 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 PPP1R10Q96QC0 940 aaKnown RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 DCLK3Q9C098 648 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 SENP6Q9GZR1 1112 aaPredicted RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 TRNAU1APQ9NX07 287 aaKnown RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 ANAPC7Q9UJX3 599 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 PRPF4O43172 522 aaKnown RBP eCLIP15.9■□□□□ 0.144e-9■■□□□ 12.1
CIRBP-228ENST00000590347 PHEXP78562 749 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 GPS1Q13098 491 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 TRMT5Q32P41 509 aaKnown RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 ATP13A4Q4VNC1 1196 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 CLIP3Q96DZ5 547 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 MMP19Q99542 508 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 RANBP17Q9H2T7 1088 aaKnown RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 TRIM17Q9Y577 477 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 CASZ1Q86V15 1759 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 MYH11P35749 1972 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 TAL1P17542 331 aaPredicted RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 SLC16A2P36021 539 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 AQP5P55064 265 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 NET1Q7Z628 596 aaPredicted RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 ZNF444Q8N0Y2 327 aaPredicted RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 RNF148Q8N7C7 305 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 DIS3LQ8TF46 1054 aaKnown RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 CFAP57Q96MR6 1250 aa15.9■□□□□ 0.14
CIRBP-228ENST00000590347 SMG5Q9UPR3 1016 aaKnown RBP15.9■□□□□ 0.14
CIRBP-228ENST00000590347 A8MU76 341 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 USP17L15C9J2P7 530 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 USP17L13C9JLJ4 530 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 USP17L11C9JVI0 530 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 USP17L18D6R9N7 530 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 USP17L22D6RA61 530 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 USP17L17D6RBQ6 530 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 USP17L19D6RCP7 530 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 USP17L20D6RJB6 530 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 LDHBP07195 334 aaKnown RBP15.89■□□□□ 0.13
CIRBP-228ENST00000590347 RBP3P10745 1247 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 RCVRNP35243 200 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 GCLMP48507 274 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 DMPKQ09013 629 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 USP17L24Q0WX57 530 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 KIF22Q14807 665 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 RSPH3Q86UC2 560 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 ZNF276Q8N554 614 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 TTC25Q96NG3 672 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 SYT11Q9BT88 431 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 CRNKL1Q9BZJ0 848 aaKnown RBP15.89■□□□□ 0.13
CIRBP-228ENST00000590347 ANKRD2Q9GZV1 360 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 TELO2Q9Y4R8 837 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 P4HA2O15460 535 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 PROCP04070 461 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 SLURP2P0DP57 97 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 TMED10P49755 219 aaKnown RBP15.89■□□□□ 0.13
CIRBP-228ENST00000590347 RAP1GDS1P52306 607 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 RELAQ04206 551 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 PTK6Q13882 451 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 EDRF1Q3B7T1 1238 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 NOP9Q86U38 636 aaKnown RBP15.89■□□□□ 0.13
CIRBP-228ENST00000590347 LRRC47Q8N1G4 583 aaKnown RBP15.89■□□□□ 0.13
CIRBP-228ENST00000590347 CD101Q93033 1021 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 HEPHQ9BQS7 1158 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 WNT8AQ9H1J5 351 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 BHMT2Q9H2M3 363 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 TYW1Q9NV66 732 aaKnown RBP15.89■□□□□ 0.13
CIRBP-228ENST00000590347 FAIMQ9NVQ4 179 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 PLA2G4CQ9UP65 541 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 DTNAQ9Y4J8 743 aa15.89■□□□□ 0.13
CIRBP-228ENST00000590347 A0A088AWK7 358 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 ZC3H11AO75152 810 aaKnown RBP eCLIP15.88■□□□□ 0.133e-7■■□□□ 12.2
CIRBP-228ENST00000590347 SERPINB7O75635 380 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 FAM155BO75949 473 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 OXSR1O95747 527 aaPredicted RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 TOP3BO95985 862 aaKnown RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 SRGAP2CP0DJJ0 459 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 SRGAP2BP0DMP2 458 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 PORP16435 677 aaPredicted RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 MYBPC1Q00872 1141 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 GRAPQ13588 217 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 CCNIQ14094 377 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 ZSWIM2Q8NEG5 633 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 GRAPLQ8TC17 118 aaPredicted RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 APEX2Q9UBZ4 518 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 TRPC5Q9UL62 973 aaPredicted RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 MAD1L1Q9Y6D9 718 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 CALUO43852 315 aaPredicted RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 LPXNO60711 386 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 ATF7P17544 494 aaPredicted RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 NRLP54845 237 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 MYL7Q01449 175 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 HIC1Q14526 733 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 OASLQ15646 514 aaKnown RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 CNGA3Q16281 694 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms