RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 FCHO2Q0JRZ9 810 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 BIRC3Q13489 604 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 KCNB1Q14721 858 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 SLC46A2Q9BY10 475 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 OSBPL6Q9BZF3 934 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 CACNA1HO95180 2353 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 SLC38A8A6NNN8 435 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 CALUO43852 315 aaPredicted RBP22.01■■□□□ 1.11
CIRBP-226ENST00000590171 NOL4O94818 638 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 KIF20AO95235 890 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 C4BPAP04003 597 aaKnown RBP22.01■■□□□ 1.11
CIRBP-226ENST00000590171 WEE1P30291 646 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 NBL1P41271 181 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 AP3M2P53677 418 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 CEP135Q66GS9 1140 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 ZNF852Q6ZMS4 543 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 C4orf50Q6ZRC1 276 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 SCN4BQ8IWT1 228 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 YAF2Q8IY57 180 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 SYAP1Q96A49 352 aaPredicted RBP22.01■■□□□ 1.11
CIRBP-226ENST00000590171 SMG9Q9H0W8 520 aaKnown RBP22.01■■□□□ 1.11
CIRBP-226ENST00000590171 SNX25Q9H3E2 840 aa22.01■■□□□ 1.11
CIRBP-226ENST00000590171 NXF1Q9UBU9 619 aaKnown RBP22.01■■□□□ 1.11
CIRBP-226ENST00000590171 DPYSL4O14531 572 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 CHADO15335 359 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 TADA3O75528 432 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 VNN1O95497 513 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 FAM163BP0C2L3 166 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 GNL1P36915 607 aaPredicted RBP22■■□□□ 1.11
CIRBP-226ENST00000590171 MAGEA11P43364 429 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 MAPRE1Q15691 268 aaKnown RBP22■■□□□ 1.11
CIRBP-226ENST00000590171 FMR1NBQ8N0W7 255 aaPredicted RBP22■■□□□ 1.11
CIRBP-226ENST00000590171 GUF1Q8N442 669 aaKnown RBP22■■□□□ 1.11
CIRBP-226ENST00000590171 OR6B3Q8NGW1 331 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 ELMO3Q96BJ8 720 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 TRMT2BQ96GJ1 504 aaKnown RBP22■■□□□ 1.11
CIRBP-226ENST00000590171 PCED1BQ96HM7 432 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 VRTNQ9H8Y1 702 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 OBP2AQ9NY56 170 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 MAGEC2Q9UBF1 373 aaPredicted RBP22■■□□□ 1.11
CIRBP-226ENST00000590171 PIAS3Q9Y6X2 628 aa22■■□□□ 1.11
CIRBP-226ENST00000590171 PROB1E7EW31 1015 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 NR2F2P24468 414 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 CYP27A1Q02318 531 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 NCOA4Q13772 614 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 ZNF699Q32M78 642 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 MDH1BQ5I0G3 518 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 C1orf210Q8IVY1 113 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 CMTM8Q8IZV2 173 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 MYCBPAPQ8TBZ2 947 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 TMC2Q8TDI7 906 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 MYRFLQ96LU7 910 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 NELL2Q99435 816 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 BCO2Q9BYV7 579 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 DPEP3Q9H4B8 488 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 SMYD3Q9H7B4 428 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 FRMD4BQ9Y2L6 1034 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 PIEZO1Q92508 2521 aa21.99■■□□□ 1.11
CIRBP-226ENST00000590171 NUP210Q8TEM1 1887 aaPredicted RBP21.98■■□□□ 1.11
CIRBP-226ENST00000590171 BDNFP23560 247 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 PNOCQ13519 176 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 NFIL3Q16649 462 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 ZACNQ401N2 412 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 C1orf220Q5T0J3 134 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 TXNDC8Q6A555 127 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 VSTM1Q6UX27 236 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 FRMD5Q7Z6J6 570 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 MAB21L3Q8N8X9 362 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 BPIFB1Q8TDL5 484 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 MRPS31Q92665 395 aaKnown RBP21.98■■□□□ 1.11
CIRBP-226ENST00000590171 CLDN23Q96B33 292 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 CCDC34Q96HJ3 373 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 ZFYVE19Q96K21 471 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 UXTQ9UBK9 157 aaPredicted RBP21.98■■□□□ 1.11
CIRBP-226ENST00000590171 ZMYM5Q9UJ78 669 aa21.98■■□□□ 1.11
CIRBP-226ENST00000590171 MRPS17Q9Y2R5 130 aaKnown RBP21.98■■□□□ 1.11
CIRBP-226ENST00000590171 GOLGA6L4A6NEF3 574 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 A8MXQ7 604 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 MAN2B1O00754 1011 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 AKAP3O75969 853 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 PTPN1P18031 435 aaKnown RBP21.97■■□□□ 1.11
CIRBP-226ENST00000590171 DDX6P26196 483 aaKnown RBP eCLIP21.97■■□□□ 1.116e-15■■□□□ 11.4
CIRBP-226ENST00000590171 AVPR1AP37288 418 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 RAP1GAPP47736 663 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 CDH8P55286 799 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 FZD5Q13467 585 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 ZCWPW2Q504Y3 356 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 ARHGAP29Q52LW3 1261 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 ZNF667Q5HYK9 610 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 SMYD4Q8IYR2 804 aaPredicted RBP21.97■■□□□ 1.11
CIRBP-226ENST00000590171 ZNF687Q8N1G0 1237 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 CELF5Q8N6W0 485 aaKnown RBP21.97■■□□□ 1.11
CIRBP-226ENST00000590171 ENGASEQ8NFI3 743 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 CSGALNACT1Q8TDX6 532 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 NDRG2Q9UN36 371 aaKnown RBP21.97■■□□□ 1.11
CIRBP-226ENST00000590171 TICRRQ7Z2Z1 1910 aa21.97■■□□□ 1.11
CIRBP-226ENST00000590171 MAPK13O15264 365 aa21.96■■□□□ 1.11
CIRBP-226ENST00000590171 CLSTN1O94985 981 aa21.96■■□□□ 1.11
CIRBP-226ENST00000590171 GRIK1P39086 918 aa21.96■■□□□ 1.11
CIRBP-226ENST00000590171 MAGEA9P43362 315 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms