RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CCINQ13939 588 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 FAM26FQ5R3K3 315 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 FAM171BQ6P995 826 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 NELFCDQ8IXH7 590 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 IQUBQ8NA54 791 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 RDH13Q8NBN7 331 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 MSANTD3Q96H12 275 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 GCNAQ96QF7 691 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 CRTAC1Q9NQ79 661 aa19.32■□□□□ 0.68
H3F3B-209ENST00000589949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.31■□□□□ 0.68
H3F3B-209ENST00000589949 F13A1P00488 732 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 CSH1P0DML2 217 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 CSH2P0DML3 217 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 ARSAP15289 507 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 CXCL12P48061 93 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 CCR3P51677 355 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 MYL7Q01449 175 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 ITPRIPL2Q3MIP1 535 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 CFAP221Q4G0U5 840 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 NAIF1Q69YI7 327 aaPredicted RBP19.31■□□□□ 0.68
H3F3B-209ENST00000589949 PKN3Q6P5Z2 889 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 MON1AQ86VX9 555 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 GRAMD1CQ8IYS0 662 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 SPEM1Q8N4L4 309 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 ZNF516Q92618 1163 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 ANKRD36BP1Q96IX9 119 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 MYRFLQ96LU7 910 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 CYP2S1Q96SQ9 504 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 IER2Q9BTL4 223 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 FAM126AQ9BYI3 521 aaPredicted RBP19.31■□□□□ 0.68
H3F3B-209ENST00000589949 LRRC27Q9C0I9 530 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 CEP250Q9BV73 2442 aa19.31■□□□□ 0.68
H3F3B-209ENST00000589949 CACNA1AO00555 2505 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 LHX1P48742 406 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 CYP2J2P51589 502 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 PLCB2Q00722 1185 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 SRSF5Q13243 272 aaKnown RBP19.3■□□□□ 0.68
H3F3B-209ENST00000589949 CUL4BQ13620 913 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 SNRNP35Q16560 246 aaKnown RBP19.3■□□□□ 0.68
H3F3B-209ENST00000589949 LPAL2Q16609 132 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 DUOXA2Q1HG44 320 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 STXBP4Q6ZWJ1 553 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 UNC13DQ70J99 1090 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 TRAPPC11Q7Z392 1133 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 WDR49Q8IV35 697 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 SPATA18Q8TC71 538 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 TRMT2BQ96GJ1 504 aaKnown RBP19.3■□□□□ 0.68
H3F3B-209ENST00000589949 CHAMP1Q96JM3 812 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 SYT15Q9BQS2 421 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 MRPL45Q9BRJ2 306 aaKnown RBP19.3■□□□□ 0.68
H3F3B-209ENST00000589949 EBF3Q9H4W6 596 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 FBRSL1Q9HCM7 1045 aaKnown RBP19.3■□□□□ 0.68
H3F3B-209ENST00000589949 TDP1Q9NUW8 608 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 NCDNQ9UBB6 729 aa19.3■□□□□ 0.68
H3F3B-209ENST00000589949 DNAH14Q0VDD8 3507 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 CHURC1-FNTBB4DL54 471 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 HRO43593 1189 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 TNNC2P02585 160 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 PDGFRBP09619 1106 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 DLATP10515 647 aaKnown RBP19.29■□□□□ 0.68
H3F3B-209ENST00000589949 PCSK1P29120 753 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 AVPR1AP37288 418 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 FNTBP49356 437 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 RPL10AP62906 217 aaKnown RBP19.29■□□□□ 0.68
H3F3B-209ENST00000589949 AMPD3Q01432 767 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 CYP24A1Q07973 514 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 MYO1EQ12965 1108 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 LRRC32Q14392 662 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 RESP18Q5W5W9 173 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 SPATA2LQ8IUW3 424 aaPredicted RBP19.29■□□□□ 0.68
H3F3B-209ENST00000589949 SCN4BQ8IWT1 228 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 SPRYD3Q8NCJ5 442 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 PLEKHO2Q8TD55 490 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 MRPS31Q92665 395 aaKnown RBP19.29■□□□□ 0.68
H3F3B-209ENST00000589949 MYLPFQ96A32 169 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 CCDC127Q96BQ5 260 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 SLC39A2Q9NP94 309 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 PARD6AQ9NPB6 346 aa19.29■□□□□ 0.68
H3F3B-209ENST00000589949 THG1LQ9NWX6 298 aaKnown RBP19.29■□□□□ 0.68
H3F3B-209ENST00000589949 C2orf78A6NCI8 922 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 WARSP23381 471 aaKnown RBP19.28■□□□□ 0.68
H3F3B-209ENST00000589949 DDX6P26196 483 aaKnown RBP eCLIP19.28■□□□□ 0.682e-12■■■□□ 16.9
H3F3B-209ENST00000589949 MAGEA11P43364 429 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 AFMP43652 599 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 USP46P62068 366 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 DNM1Q05193 864 aaKnown RBP19.28■□□□□ 0.68
H3F3B-209ENST00000589949 RUNX3Q13761 415 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 PSMD6Q15008 389 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 SURF1Q15526 300 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 FSTL4Q6MZW2 842 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 C1orf228Q6PIY5 440 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 DPH6Q7L8W6 267 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 ERMP1Q7Z2K6 904 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 FUBP3Q96I24 572 aaKnown RBP eCLIP19.28■□□□□ 0.689e-76■■■■■ 40.3
H3F3B-209ENST00000589949 KIAA1586Q9HCI6 787 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 TMEM30AQ9NV96 361 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 POLR3BQ9NW08 1133 aaPredicted RBP19.28■□□□□ 0.68
H3F3B-209ENST00000589949 GCNT4Q9P109 453 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 ZMYM5Q9UJ78 669 aa19.28■□□□□ 0.68
H3F3B-209ENST00000589949 GREB1Q4ZG55 1949 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms