RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 LAMA2P24043 3122 aaKnown RBP16.12■□□□□ 0.17
ATG4D-211ENST00000589753 MTMR11A4FU01 709 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 O00370 1275 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 ADORA2BP29275 332 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 PRKCIP41743 596 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 CDR1P51861 262 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 KLHL30Q0D2K2 578 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 CNGA2Q16280 664 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 GPR153Q6NV75 609 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 ADGRD2Q7Z7M1 963 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 ZNF677Q86XU0 584 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 FUKQ8N0W3 1084 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 SPPL2BQ8TCT7 592 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 FUBP3Q96I24 572 aaKnown RBP eCLIP16.11■□□□□ 0.17
ATG4D-211ENST00000589753 FAM161BQ96MY7 647 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 ZSWIM1Q9BR11 485 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 HAUS4Q9H6D7 363 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 ABCB6Q9NP58 842 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 ABI2Q9NYB9 513 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-211ENST00000589753 AFF4Q9UHB7 1163 aaKnown RBP16.11■□□□□ 0.17
ATG4D-211ENST00000589753 NOCTQ9UK39 431 aaKnown RBP16.11■□□□□ 0.17
ATG4D-211ENST00000589753 TSPAN16Q9UKR8 245 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.11■□□□□ 0.17
ATG4D-211ENST00000589753 BZW2Q9Y6E2 419 aaKnown RBP16.11■□□□□ 0.17
ATG4D-211ENST00000589753 CHD9Q3L8U1 2897 aa16.11■□□□□ 0.17
ATG4D-211ENST00000589753 ATG2AQ2TAZ0 1938 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 CLDN5O00501 218 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 TGM5O43548 720 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 CLASP2O75122 1294 aaKnown RBP16.1■□□□□ 0.17
ATG4D-211ENST00000589753 SERPING1P05155 500 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 SKILP12757 684 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 ATF2P15336 505 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 GSDMDP57764 484 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 ADCY1Q08828 1119 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 GOLGA7BQ2TAP0 167 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 CFAP221Q4G0U5 840 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 TDRD12Q587J7 1177 aaKnown RBP16.1■□□□□ 0.17
ATG4D-211ENST00000589753 TAF3Q5VWG9 929 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 LCLAT1Q6UWP7 414 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 PAQR9Q6ZVX9 377 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 RBM23Q86U06 439 aaKnown RBP16.1■□□□□ 0.17
ATG4D-211ENST00000589753 FAM35AQ86V20 835 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 ATAD1Q8NBU5 361 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 SLC20A1Q8WUM9 679 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 DDX1Q92499 740 aaKnown RBP16.1■□□□□ 0.17
ATG4D-211ENST00000589753 SMARCD1Q96GM5 515 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 PDLIM2Q96JY6 352 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 ZNF518BQ9C0D4 1074 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 NSUN3Q9H649 340 aaKnown RBP16.1■□□□□ 0.17
ATG4D-211ENST00000589753 TLE6Q9H808 572 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 HESX1Q9UBX0 185 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 MAFFQ9ULX9 164 aa16.1■□□□□ 0.17
ATG4D-211ENST00000589753 PER2O15055 1255 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 MICAL2O94851 1124 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 VNN2O95498 520 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 GLUD1P00367 558 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 C1RP00736 705 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 MMEP08473 750 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 BDNFP23560 247 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 ELF1P32519 619 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 SSTR3P32745 418 aaPredicted RBP16.09■□□□□ 0.17
ATG4D-211ENST00000589753 CLCN4P51793 760 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 CDR2Q01850 454 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 MEA1Q16626 185 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 HGSNATQ68CP4 663 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 LILRA6Q6PI73 481 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 WDR59Q6PJI9 974 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 CCDC186Q7Z3E2 898 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 ANKRD52Q8NB46 1076 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 PANX2Q96RD6 677 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 CDCA3Q99618 268 aaPredicted RBP16.09■□□□□ 0.17
ATG4D-211ENST00000589753 AGPAT1Q99943 283 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 RHOBTB2Q9BYZ6 727 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 PDCL3Q9H2J4 239 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 KRT82Q9NSB4 513 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 HSFX1Q9UBD0 423 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 PCDHGC3Q9UN70 934 aa16.09■□□□□ 0.17
ATG4D-211ENST00000589753 TRIOBPQ9H2D6 2365 aa16.08■□□□□ 0.17
ATG4D-211ENST00000589753 M0QYV0 167 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 AP1G2O75843 785 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 SPATA31D3P0C874 917 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 FAM200BP0CF97 657 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 POU3F3P20264 500 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-211ENST00000589753 CYP2F1P24903 491 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 MAGEA11P43364 429 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 NRIP1P48552 1158 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 BCAT1P54687 386 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 SLC8A3P57103 927 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 DUSP4Q13115 394 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 DUSP6Q16828 381 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 VSTM1Q6UX27 236 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 SPATA31D4Q6ZUB0 917 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 ZNF571Q7Z3V5 609 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-211ENST00000589753 TTC30AQ86WT1 665 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 TCEAL8Q8IYN2 117 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 GAS2L1Q99501 681 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-211ENST00000589753 SEPT5Q99719 369 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-211ENST00000589753 DUSP16Q9BY84 665 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 CYP4F11Q9HBI6 524 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms