RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 LACTB2Q53H82 288 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 RBBP8Q99708 897 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 PPRC1Q5VV67 1664 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 CBFA2T3O75081 653 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 ALADP13716 330 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 PDGFRAP16234 1089 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 RPL21P46778 160 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 ST3GAL1Q11201 340 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 PTK2BQ14289 1009 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 ARMCX4Q5H9R4 360 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 C6orf10Q5SRN2 563 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.2■□□□□ 0.022e-7■■■■■ 278.5
SMARCA4-214ENST00000589677 TAGAPQ8N103 731 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 ZNF398Q8TD17 642 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 ZNF75CPQ92670 426 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 ACTL7BQ9Y614 415 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 SHOX2O60902 331 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 ZNF23P17027 643 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 ELMO2Q96JJ3 720 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 NLRP4Q96MN2 994 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 PPEF1O14829 653 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 RPA1P27694 616 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 SSTR3P32745 418 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 TSPY1Q01534 308 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 TAF2Q6P1X5 1199 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 OMA1Q96E52 524 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 LRMDAQ9H2I8 198 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 FAM196BA6NMK8 535 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 MYO1GB0I1T2 1018 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 MCL1Q07820 350 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 HLFQ16534 295 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 PARP6Q2NL67 630 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 OLFML1Q6UWY5 402 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 STKLD1Q8NE28 680 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 MRPS26Q9BYN8 205 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 EPB41L4AQ9HCS5 686 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 ARHGEF38Q9NXL2 777 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 DIP2CQ9Y2E4 1556 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 PDE2AO00408 941 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 TRIM24O15164 1050 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 C4BPBP20851 252 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 SEL1L3Q68CR1 1132 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 SLC25A41Q8N5S1 370 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 C1orf50Q9BV19 199 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 TMCO1Q9UM00 188 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 MINPP1Q9UNW1 487 aa15.19■□□□□ 0.02
SMARCA4-214ENST00000589677 DYTNA2CJ06 578 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 GRB10Q13322 594 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 GRAPQ13588 217 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 RSBN1Q5VWQ0 802 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 GRAPLQ8TC17 118 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 PIGBQ92521 554 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 TBC1D10AQ9BXI6 508 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 RIC8BQ9NVN3 520 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 FEM1BQ9UK73 627 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 A0A0G2JLW4 131 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 GOLGA8TH3BQL2 631 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 TPST1O60507 370 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 PPP1R2P1Q96PQ5 205 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 FAM193BQ96PV7 902 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 EGFL8Q99944 293 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 TMEM245Q9H330 911 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 OSGEPQ9NPF4 335 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 FOXN3O00409 490 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 RALBP11234 206 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 UBE3AQ05086 875 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 KCTD2Q14681 263 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 NLGN1Q8N2Q7 840 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 EXD1Q8NHP7 514 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 CALML6Q8TD86 181 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 NDNQ99608 321 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 DCUN1D5Q9BTE7 237 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 NRDE2Q9H7Z3 1164 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 TRIM45Q9H8W5 580 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 CD209Q9NNX6 404 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 SORCS3Q9UPU3 1222 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 SHOC2Q9UQ13 582 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 PCDHGC5Q9Y5F6 944 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 ZSCAN9O15535 394 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 TFE3P19532 575 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 NR1H2P55055 460 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 NCKAP1LP55160 1127 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 CSTF3Q12996 717 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 TTC27Q6P3X3 843 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 NANOGNBQ7Z5D8 188 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 ZNF554Q86TJ5 538 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 HEATR4Q86WZ0 1026 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 OR6Y1Q8NGX8 325 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 ASAP3Q8TDY4 903 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 IL1RL2Q9HB29 575 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 NINJ2Q9NZG7 142 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 PCDHGB4Q9UN71 923 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 DLC1Q96QB1 1528 aa15.18■□□□□ 0.02
SMARCA4-214ENST00000589677 CCDC78A2IDD5 438 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 TBC1D12O60347 775 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 XPAP23025 273 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 FDFT1P37268 417 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 TLK2Q86UE8 772 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 GPBP1L1Q9HC44 474 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms