RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 ANAPC1Q9H1A4 1944 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 SOBPA7XYQ1 873 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 HUS1O60921 280 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 CSH1P0DML2 217 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 CSH2P0DML3 217 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 DDX6P26196 483 aaKnown RBP eCLIP25.51■■□□□ 1.672e-15■□□□□ 9.7
LSM7-205ENST00000589532 CXCL12P48061 93 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 NRLP54845 237 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 EHHADHQ08426 723 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 PPP2R5DQ14738 602 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 SOWAHAQ2M3V2 549 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 SDHAF4Q5VUM1 108 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 RESP18Q5W5W9 173 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 SHC4Q6S5L8 630 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 ADGRF2Q8IZF7 708 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 CSGALNACT2Q8N6G5 542 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 KBTBD7Q8WVZ9 684 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 MYRFLQ96LU7 910 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 SNX9Q9Y5X1 595 aa25.51■■□□□ 1.67
LSM7-205ENST00000589532 PRPF40AO75400 957 aaKnown RBP25.5■■□□□ 1.67
LSM7-205ENST00000589532 TMEM191BP0C7N4 346 aa25.5■■□□□ 1.67
LSM7-205ENST00000589532 CMA1P23946 247 aa25.5■■□□□ 1.67
LSM7-205ENST00000589532 CYP2F1P24903 491 aa25.5■■□□□ 1.67
LSM7-205ENST00000589532 RBP5P82980 135 aa25.5■■□□□ 1.67
LSM7-205ENST00000589532 MYL7Q01449 175 aa25.5■■□□□ 1.67
LSM7-205ENST00000589532 DMWDQ09019 674 aa25.5■■□□□ 1.67
LSM7-205ENST00000589532 ZNF638Q14966 1978 aaKnown RBP25.5■■□□□ 1.67
LSM7-205ENST00000589532 DGKKQ5KSL6 1271 aa25.5■■□□□ 1.67
LSM7-205ENST00000589532 KIF9Q9HAQ2 790 aa25.5■■□□□ 1.67
LSM7-205ENST00000589532 MAGEF1Q9HAY2 307 aa25.5■■□□□ 1.67
LSM7-205ENST00000589532 OTOL1A6NHN0 477 aaPredicted RBP25.49■■□□□ 1.67
LSM7-205ENST00000589532 EIF3DO15371 548 aaKnown RBP eCLIP25.49■■□□□ 1.67
LSM7-205ENST00000589532 ZNF268Q14587 947 aaPredicted RBP25.49■■□□□ 1.67
LSM7-205ENST00000589532 PON2Q15165 354 aa25.49■■□□□ 1.67
LSM7-205ENST00000589532 TAF12Q16514 161 aa25.49■■□□□ 1.67
LSM7-205ENST00000589532 DDR2Q16832 855 aa25.49■■□□□ 1.67
LSM7-205ENST00000589532 ITPRIPL2Q3MIP1 535 aa25.49■■□□□ 1.67
LSM7-205ENST00000589532 TXNDC8Q6A555 127 aa25.49■■□□□ 1.67
LSM7-205ENST00000589532 MAB21L3Q8N8X9 362 aa25.49■■□□□ 1.67
LSM7-205ENST00000589532 FUBP3Q96I24 572 aaKnown RBP eCLIP25.49■■□□□ 1.67
LSM7-205ENST00000589532 PARD6AQ9NPB6 346 aa25.49■■□□□ 1.67
LSM7-205ENST00000589532 HSPBP1Q9NZL4 362 aa25.49■■□□□ 1.67
LSM7-205ENST00000589532 GTF3C4Q9UKN8 822 aa25.49■■□□□ 1.67
LSM7-205ENST00000589532 HELZP42694 1942 aaKnown RBP25.49■■□□□ 1.67
LSM7-205ENST00000589532 A0A1W2PQ27 194 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 A0A1W2PQ64 194 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 A0A1W2PQD8 194 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 TGFB1I1O43294 461 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 KRT19P08727 400 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 AVPR1AP37288 418 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 LHX1P48742 406 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 AMPD3Q01432 767 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 PUM1Q14671 1186 aaKnown RBP eCLIP25.48■■□□□ 1.67
LSM7-205ENST00000589532 FAM171BQ6P995 826 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 MON1AQ86VX9 555 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 ANKRD36BP1Q96IX9 119 aa25.48■■□□□ 1.67
LSM7-205ENST00000589532 KIAA1549LQ6ZVL6 1849 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 PCSK1P29120 753 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 HOXC13P31276 330 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 RPL10AP62906 217 aaKnown RBP25.47■■□□□ 1.67
LSM7-205ENST00000589532 TRIM68Q6AZZ1 485 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 STXBP4Q6ZWJ1 553 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 DPH6Q7L8W6 267 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 WDR49Q8IV35 697 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 SYNPOQ8N3V7 929 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 GPR161Q8N6U8 529 aaKnown RBP25.47■■□□□ 1.67
LSM7-205ENST00000589532 ZNF507Q8TCN5 953 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 NOC3LQ8WTT2 800 aaKnown RBP25.47■■□□□ 1.67
LSM7-205ENST00000589532 MRPS31Q92665 395 aaKnown RBP25.47■■□□□ 1.67
LSM7-205ENST00000589532 DHX58Q96C10 678 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 CCDC34Q96HJ3 373 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 GZF1Q9H116 711 aaPredicted RBP25.47■■□□□ 1.67
LSM7-205ENST00000589532 AGPAT3Q9NRZ7 376 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 TDP1Q9NUW8 608 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 THG1LQ9NWX6 298 aaKnown RBP25.47■■□□□ 1.67
LSM7-205ENST00000589532 USP25Q9UHP3 1055 aa25.47■■□□□ 1.67
LSM7-205ENST00000589532 MAGED2Q9UNF1 606 aaPredicted RBP25.47■■□□□ 1.67
LSM7-205ENST00000589532 SPTBN2O15020 2390 aa25.46■■□□□ 1.67
LSM7-205ENST00000589532 UBE4BO95155 1302 aa25.46■■□□□ 1.67
LSM7-205ENST00000589532 MED19A0JLT2 244 aaPredicted RBP25.46■■□□□ 1.67
LSM7-205ENST00000589532 ZNF233A6NK53 670 aa25.46■■□□□ 1.67
LSM7-205ENST00000589532 MAGEA11P43364 429 aa25.46■■□□□ 1.67
LSM7-205ENST00000589532 USP4Q13107 963 aa25.46■■□□□ 1.67
LSM7-205ENST00000589532 FAM26FQ5R3K3 315 aa25.46■■□□□ 1.67
LSM7-205ENST00000589532 CEP57L1Q8IYX8 460 aa25.46■■□□□ 1.67
LSM7-205ENST00000589532 HPDLQ96IR7 371 aa25.46■■□□□ 1.67
LSM7-205ENST00000589532 GKN1Q9NS71 199 aa25.46■■□□□ 1.67
LSM7-205ENST00000589532 UXTQ9UBK9 157 aaPredicted RBP25.46■■□□□ 1.67
LSM7-205ENST00000589532 NME7Q9Y5B8 376 aa25.46■■□□□ 1.67
LSM7-205ENST00000589532 CHURC1-FNTBB4DL54 471 aa25.45■■□□□ 1.66
LSM7-205ENST00000589532 HOXA6P31267 233 aa25.45■■□□□ 1.66
LSM7-205ENST00000589532 FNTBP49356 437 aa25.45■■□□□ 1.66
LSM7-205ENST00000589532 ASIC1P78348 528 aa25.45■■□□□ 1.66
LSM7-205ENST00000589532 RUNX3Q13761 415 aa25.45■■□□□ 1.66
LSM7-205ENST00000589532 SURF1Q15526 300 aa25.45■■□□□ 1.66
LSM7-205ENST00000589532 ZNF77Q15935 545 aa25.45■■□□□ 1.66
LSM7-205ENST00000589532 RSPO4Q2I0M5 234 aaPredicted RBP25.45■■□□□ 1.66
LSM7-205ENST00000589532 TMEM196Q5HYL7 178 aa25.45■■□□□ 1.66
LSM7-205ENST00000589532 LAIR1Q6GTX8 287 aa25.45■■□□□ 1.66
LSM7-205ENST00000589532 PKN3Q6P5Z2 889 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms