RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 IL18RAPO95256 599 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 INHAP05111 366 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 PRKCBP05771 671 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 VIMP08670 466 aaKnown RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 SRGAP2CP0DJJ0 459 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 SLCO1A2P46721 670 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 IREB2P48200 963 aaKnown RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 LACTBP83111 547 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 LAMTOR4Q0VGL1 99 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 KLF1Q13351 362 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 AUHQ13825 339 aaKnown RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 HADHQ16836 314 aaKnown RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 C6orf89Q6UWU4 347 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 ARHGEF18Q6ZSZ5 1173 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 PCGF5Q86SE9 256 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 ARHGEF2Q92974 986 aaKnown RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 ACO2Q99798 780 aaKnown RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 APOBEC3GQ9HC16 384 aaKnown RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 NKIRAS1Q9NYS0 192 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 DRG1Q9Y295 367 aaKnown RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 MYH9P35579 1960 aaKnown RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 LOC102724159A0A0B4J2E5 919 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 MSCO60682 206 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 KRT7P08729 469 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 P4HA1P13674 534 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ZNF132P52740 706 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 IFI35P80217 286 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 TFAMQ00059 246 aaKnown RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ACTN3Q08043 901 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 PRKG1Q13976 671 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ITIH4Q14624 930 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 PWP2Q15269 919 aaKnown RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 LLGL1Q15334 1064 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 KYAT1Q16773 422 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ZNF699Q32M78 642 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 TFDP3Q5H9I0 405 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 RHBDF2Q6PJF5 856 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 MPZL3Q6UWV2 235 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 PPP1R21Q6ZMI0 780 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 GADL1Q6ZQY3 521 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 PHLDB2Q86SQ0 1253 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 RNF149Q8NC42 400 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 OR5B17Q8NGF7 314 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 UHMK1Q8TAS1 419 aaKnown RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 MDM1Q8TC05 714 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 EPS8L3Q8TE67 593 aaKnown RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ATG4AQ8WYN0 398 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ELMO3Q96BJ8 720 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 DCPSQ96C86 337 aaKnown RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 MIS12Q9H081 205 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 SMARCAD1Q9H4L7 1026 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 CISHQ9NSE2 258 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 WDR35Q9P2L0 1181 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 POLIQ9UNA4 740 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 EFR3BQ9Y2G0 817 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ACTL7BQ9Y614 415 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 PTPRJQ12913 1337 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 UMODL1Q5DID0 1318 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ZNF541Q9H0D2 1346 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 KIAA1217Q5T5P2 1943 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ACKR2O00590 384 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 USP2O75604 605 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 KRT1P04264 644 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 GHRP10912 638 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ATF7P17544 494 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 CD58P19256 250 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 DRD4P21917 467 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 IVDP26440 423 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 PTPN7P35236 360 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 NF2P35240 595 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 GJC1P36383 396 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 VGLL4Q14135 290 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 KCTD2Q14681 263 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 TRIP13Q15645 432 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 KYNUQ16719 465 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 TNFAIP8L3Q5GJ75 292 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 IZUMO3Q5VZ72 239 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 CDCA2Q69YH5 1023 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 TSHZ1Q6ZSZ6 1077 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 POLNQ7Z5Q5 900 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ETFBKMTQ8IXQ9 262 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 DHX37Q8IY37 1157 aaKnown RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ZCCHC9Q8N567 271 aaKnown RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 GBP7Q8N8V2 638 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ZNF784Q8NCA9 323 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 RNF34Q969K3 372 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 PRMT1Q99873 361 aaKnown RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 TRIM7Q9C029 511 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 MTMR12Q9C0I1 747 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 HAPLN2Q9GZV7 340 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 SYNCQ9H7C4 482 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 KCNK9Q9NPC2 374 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 CPSF3Q9UKF6 684 aaKnown RBP7.8□□□□□ -1.16
ZNF540-206ENST00000589117 AGTPBP1Q9UPW5 1226 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 ARID2Q68CP9 1835 aa7.8□□□□□ -1.16
ZNF540-206ENST00000589117 CXCL11O14625 94 aa7.79□□□□□ -1.16
ZNF540-206ENST00000589117 HBP1O60381 514 aa7.79□□□□□ -1.16
ZNF540-206ENST00000589117 B4GALT4O60513 344 aa7.79□□□□□ -1.16
ZNF540-206ENST00000589117 CST3P01034 146 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-206ENST00000589117 CALCAP01258 141 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms