RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 IFT74Q96LB3 600 aa14.11□□□□□ -0.15
KDM4B-208ENST00000589104 TRABDQ9H4I3 376 aa14.11□□□□□ -0.15
KDM4B-208ENST00000589104 FAM124BQ9H5Z6 455 aaPredicted RBP14.11□□□□□ -0.15
KDM4B-208ENST00000589104 STRIP2Q9ULQ0 834 aa14.11□□□□□ -0.15
KDM4B-208ENST00000589104 UNCXA6NJT0 531 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 DCTN3O75935 186 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 TMEM63AO94886 807 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 PRKCHP24723 683 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 GEMIN4P57678 1058 aaKnown RBP14.1□□□□□ -0.15
KDM4B-208ENST00000589104 ATP13A4Q4VNC1 1196 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 ZNF606Q8WXB4 792 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 NCSTNQ92542 709 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 ELMO3Q96BJ8 720 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 KLHL29Q96CT2 875 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 TMEM39BQ9GZU3 492 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 HMX2A2RU54 273 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 ZSCAN5DPP0CG00 497 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 ETS1P14921 441 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 L1CAMP32004 1257 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 RPL34P49207 117 aaKnown RBP14.1□□□□□ -0.15
KDM4B-208ENST00000589104 ILDR2Q71H61 639 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 WDR49Q8IV35 697 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 BRSK2Q8IWQ3 736 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 OR5B17Q8NGF7 314 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 UHMK1Q8TAS1 419 aaKnown RBP14.1□□□□□ -0.15
KDM4B-208ENST00000589104 RAB3IPQ96QF0 476 aaPredicted RBP14.1□□□□□ -0.15
KDM4B-208ENST00000589104 RASA4BC9J798 803 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 MAP3K13O43283 966 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 RASA4O43374 803 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 AP3M2P53677 418 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 SOX10P56693 466 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 CIAPIN1Q6FI81 312 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 ZPBP2Q6X784 338 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 IGDCC3Q8IVU1 814 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 SRRM1Q8IYB3 904 aaKnown RBP14.1□□□□□ -0.15
KDM4B-208ENST00000589104 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.1□□□□□ -0.15
KDM4B-208ENST00000589104 C9orf72Q96LT7 481 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 ASIC3Q9UHC3 531 aa14.1□□□□□ -0.15
KDM4B-208ENST00000589104 SPARCL1Q14515 664 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 MEX3CQ5U5Q3 659 aaKnown RBP14.09□□□□□ -0.15
KDM4B-208ENST00000589104 SPOPLQ6IQ16 392 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 ZNF534Q76KX8 674 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 PCGF5Q86SE9 256 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 RBBP8NLQ8NC74 664 aaPredicted RBP14.09□□□□□ -0.15
KDM4B-208ENST00000589104 SLC44A1Q8WWI5 657 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 GATA6Q92908 595 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 MCRS1Q96EZ8 462 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 FAM84AQ96KN4 292 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 PITPNM3Q9BZ71 974 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 SIRPGQ9P1W8 387 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 CPSF3Q9UKF6 684 aaKnown RBP14.09□□□□□ -0.15
KDM4B-208ENST00000589104 TTLL3Q9Y4R7 772 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 HOXC6P09630 235 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 PIGHQ14442 188 aaPredicted RBP14.09□□□□□ -0.15
KDM4B-208ENST00000589104 STXBP5Q5T5C0 1151 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 RAB3IL1Q8TBN0 382 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 MCMBPQ9BTE3 642 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 DNAJB4Q9UDY4 337 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 GGT7Q9UJ14 662 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 TCRBV7S3A2A0A539 114 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 LRCH4O75427 683 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 PRKCGP05129 697 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 SUPT20HL2P0C7V6 817 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 RARBP10826 455 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 ADCY8P40145 1251 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 SUPT20HL1Q3ZLR7 823 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 TRNP1Q6NT89 227 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 USP37Q86T82 979 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 GDAP1Q8TB36 358 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 SLC7A14Q8TBB6 771 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 STON2Q8WXE9 905 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 TFAP2BQ92481 460 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 ALKBH8Q96BT7 664 aaKnown RBP14.09□□□□□ -0.15
KDM4B-208ENST00000589104 USP29Q9HBJ7 922 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 TMEM165Q9HC07 324 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 C1orf112Q9NSG2 853 aa14.09□□□□□ -0.15
KDM4B-208ENST00000589104 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 TJP3O95049 919 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 ALOX15P16050 662 aaPredicted RBP14.08□□□□□ -0.16
KDM4B-208ENST00000589104 IL4RP24394 825 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 NSFP46459 744 aaKnown RBP14.08□□□□□ -0.16
KDM4B-208ENST00000589104 RAB27AP51159 221 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 MRPS5P82675 430 aaKnown RBP14.08□□□□□ -0.16
KDM4B-208ENST00000589104 HNRNPDQ14103 355 aaKnown RBP14.08□□□□□ -0.16
KDM4B-208ENST00000589104 ACAP1Q15027 740 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 DBN1Q16643 649 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 FOXB2Q5VYV0 432 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 PPIL6Q8IXY8 311 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 F8VP50 259 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 ATP5BP06576 529 aaKnown RBP14.08□□□□□ -0.16
KDM4B-208ENST00000589104 GNA15P30679 374 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 EFTUD2Q15029 972 aaKnown RBP eCLIP14.08□□□□□ -0.163e-7■■■■□ 24.1
KDM4B-208ENST00000589104 TBC1D25Q3MII6 688 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 FAM102BQ5T8I3 360 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 THNSL1Q8IYQ7 743 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 SCYL3Q8IZE3 742 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 SLC4A11Q8NBS3 891 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 RFWD2Q8NHY2 731 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 APBB2Q92870 758 aa14.08□□□□□ -0.16
KDM4B-208ENST00000589104 FAM213AQ9BRX8 229 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms