RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 LRRC32Q14392 662 aa22.9■■□□□ 1.26
NEDD4L-225ENST00000589054 DGKKQ5KSL6 1271 aa22.9■■□□□ 1.26
NEDD4L-225ENST00000589054 CCDC65Q8IXS2 484 aa22.9■■□□□ 1.26
NEDD4L-225ENST00000589054 ADGRF2Q8IZF7 708 aa22.9■■□□□ 1.26
NEDD4L-225ENST00000589054 TMEM86AQ8N2M4 240 aa22.9■■□□□ 1.26
NEDD4L-225ENST00000589054 TOP6BLQ8N6T0 577 aa22.9■■□□□ 1.26
NEDD4L-225ENST00000589054 GZF1Q9H116 711 aaPredicted RBP22.9■■□□□ 1.26
NEDD4L-225ENST00000589054 CRTAC1Q9NQ79 661 aa22.9■■□□□ 1.26
NEDD4L-225ENST00000589054 TDP1Q9NUW8 608 aa22.9■■□□□ 1.26
NEDD4L-225ENST00000589054 HSPBP1Q9NZL4 362 aa22.9■■□□□ 1.26
NEDD4L-225ENST00000589054 CST3P01034 146 aaPredicted RBP22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 CSH1P0DML2 217 aa22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 CSH2P0DML3 217 aa22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 ATXN1P54253 815 aaKnown RBP22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 PSMC1P62191 440 aaKnown RBP22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 SPEM2Q0P670 501 aa22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 RUNX3Q13761 415 aa22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 DHX58Q96C10 678 aa22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 MYRFLQ96LU7 910 aa22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 TNMDQ9H2S6 317 aa22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 ABCB6Q9NP58 842 aa22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 KIF26AQ9ULI4 1882 aaPredicted RBP22.89■■□□□ 1.25
NEDD4L-225ENST00000589054 PPP6R2O75170 966 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 TMEM191BP0C7N4 346 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 AVPR1AP37288 418 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 MYL7Q01449 175 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 EHHADHQ08426 723 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 TMEM196Q5HYL7 178 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 C1orf228Q6PIY5 440 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 PRR23BQ6ZRT6 265 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 RDH13Q8NBN7 331 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 ZNF507Q8TCN5 953 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 EZH1Q92800 747 aaPredicted RBP22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 HPDLQ96IR7 371 aa22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 THG1LQ9NWX6 298 aaKnown RBP22.88■■□□□ 1.25
NEDD4L-225ENST00000589054 SPTBN2O15020 2390 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 ZNF233A6NK53 670 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 CLIC2O15247 247 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 LHX1P48742 406 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 PXNP49023 591 aaPredicted RBP22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 USP46P62068 366 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 ZXDBP98169 803 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 FOXD4L6Q3SYB3 417 aaPredicted RBP22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 CFAP221Q4G0U5 840 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 FOXD4L3Q6VB84 417 aaPredicted RBP22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 SCN4BQ8IWT1 228 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 ZNF516Q92618 1163 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 MRPS31Q92665 395 aaKnown RBP22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 TRMT2BQ96GJ1 504 aaKnown RBP22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 GCNT4Q9P109 453 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 USP18Q9UMW8 372 aa22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.87■■□□□ 1.25
NEDD4L-225ENST00000589054 C2orf78A6NCI8 922 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 ANTXRLA6NF34 631 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 TRDMT1O14717 391 aaKnown RBP22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 EGFP01133 1207 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 PDGFRBP09619 1106 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 DDX6P26196 483 aaKnown RBP eCLIP22.86■■□□□ 1.259e-8■■■■■ 192.2
NEDD4L-225ENST00000589054 GALK1P51570 392 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 RPL10AP62906 217 aaKnown RBP22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 ASIC1P78348 528 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 SIM2Q14190 667 aaPredicted RBP22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 PPP2R5DQ14738 602 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 ZNF77Q15935 545 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 LAIR1Q6GTX8 287 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 CNNM4Q6P4Q7 775 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 TRAPPC11Q7Z392 1133 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 LONP2Q86WA8 852 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 SPATA2LQ8IUW3 424 aaPredicted RBP22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 SPATA18Q8TC71 538 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 SCFD1Q8WVM8 642 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 MYLPFQ96A32 169 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 ANKRD36BP1Q96IX9 119 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 C7orf25Q9BPX7 421 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 SYT15Q9BQS2 421 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 MRPL45Q9BRJ2 306 aaKnown RBP22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 BLZF1Q9H2G9 400 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 AGPAT3Q9NRZ7 376 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 TMEM30AQ9NV96 361 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 DENND4CQ5VZ89 1909 aa22.86■■□□□ 1.25
NEDD4L-225ENST00000589054 ZNF268Q14587 947 aaPredicted RBP22.85■■□□□ 1.25
NEDD4L-225ENST00000589054 DUOXA2Q1HG44 320 aa22.85■■□□□ 1.25
NEDD4L-225ENST00000589054 NELFCDQ8IXH7 590 aa22.85■■□□□ 1.25
NEDD4L-225ENST00000589054 ARL14EPQ8N8R7 260 aaPredicted RBP22.85■■□□□ 1.25
NEDD4L-225ENST00000589054 LINC00597Q9H2U6 94 aa22.85■■□□□ 1.25
NEDD4L-225ENST00000589054 TRPC7Q9HCX4 862 aa22.85■■□□□ 1.25
NEDD4L-225ENST00000589054 GMEB2Q9UKD1 530 aa22.85■■□□□ 1.25
NEDD4L-225ENST00000589054 OBSL1O75147 1896 aa22.85■■□□□ 1.25
NEDD4L-225ENST00000589054 KIAA0391O15091 583 aaKnown RBP22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 EIF3DO15371 548 aaKnown RBP eCLIP22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 CUTAO60888 179 aa22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 WARSP23381 471 aaKnown RBP22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 BDNFP23560 247 aa22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 PCSK1P29120 753 aa22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 CACNA2D1P54289 1103 aa22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 FAM26FQ5R3K3 315 aa22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 DPH6Q7L8W6 267 aa22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 WDR49Q8IV35 697 aa22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 SYNPOQ8N3V7 929 aa22.84■■□□□ 1.25
NEDD4L-225ENST00000589054 GPR161Q8N6U8 529 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms