RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 NFX1Q12986 1120 aaKnown RBP9.26□□□□□ -0.93
SMAD4-206ENST00000588860 CNGA2Q16280 664 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 SV2CQ496J9 727 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 XKR4Q5GH76 650 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 FBXO47Q5MNV8 452 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 CCSAPQ6IQ19 270 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-206ENST00000588860 SND1Q7KZF4 910 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMAD4-206ENST00000588860 RNF180Q86T96 592 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 ACOT1Q86TX2 421 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 SLC13A5Q86YT5 568 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-206ENST00000588860 RHOT1Q8IXI2 618 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 HACE1Q8IYU2 909 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 ARRDC4Q8NCT1 418 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 C3orf20Q8ND61 904 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 OR6B3Q8NGW1 331 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 UBA3Q8TBC4 463 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 GDAP1L1Q96MZ0 367 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 CPXM1Q96SM3 734 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 CFHR5Q9BXR6 569 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 SNX25Q9H3E2 840 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 ACBD3Q9H3P7 528 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 GOLGA2P5Q9HBQ8 144 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 TJP2Q9UDY2 1190 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 AMACRQ9UHK6 382 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 MTUS1Q9ULD2 1270 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 KIAA1257Q9ULG3 409 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 NOD1Q9Y239 953 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 NR2E1Q9Y466 385 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 GRIN2DO15399 1336 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 PTPRDP23468 1912 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 TCRBV7S2A1N4TA0A589 114 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 GPR182O15218 404 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 TTI1O43156 1089 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 PSMA2P25787 234 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 PNPLA4P41247 253 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 CARSP49589 748 aaKnown RBP9.25□□□□□ -0.93
SMAD4-206ENST00000588860 TAF6P49848 677 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 ACLYP53396 1101 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 DR1Q01658 176 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 OGDHQ02218 1023 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 SOX4Q06945 474 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-206ENST00000588860 ZNF252P-AS1Q0IIN9 211 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 GPS2Q13227 327 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 PDCLQ13371 301 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 ITGA7Q13683 1181 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 STILQ15468 1287 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 MAP3K21Q5TCX8 1036 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 EMBQ6PCB8 327 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 LCLAT1Q6UWP7 414 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 MAATS1Q7Z4T9 603 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 RPAINQ86UA6 219 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 XYLT1Q86Y38 959 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 CCDC50Q8IVM0 306 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 KATNAL2Q8IYT4 538 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 IPO4Q8TEX9 1081 aaKnown RBP9.25□□□□□ -0.93
SMAD4-206ENST00000588860 MAGOHBQ96A72 148 aaKnown RBP9.25□□□□□ -0.93
SMAD4-206ENST00000588860 C18orf8Q96DM3 657 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 DDX27Q96GQ7 796 aaKnown RBP9.25□□□□□ -0.93
SMAD4-206ENST00000588860 ZFP42Q96MM3 310 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 TRIM51Q9BSJ1 452 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 DNAI2Q9GZS0 605 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 CHST12Q9NRB3 414 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 METTL5Q9NRN9 209 aaKnown RBP9.25□□□□□ -0.93
SMAD4-206ENST00000588860 FAM49BQ9NUQ9 324 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 FAM105AQ9NUU6 356 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 KLHL11Q9NVR0 708 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMAD4-206ENST00000588860 WDR35Q9P2L0 1181 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 TSPAN16Q9UKR8 245 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 NFU1Q9UMS0 254 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 TRIM17Q9Y577 477 aa9.25□□□□□ -0.93
SMAD4-206ENST00000588860 PATJQ8NI35 1801 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 MYO16Q9Y6X6 1858 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 FAM187AA6NFU0 413 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 SIGLEC16A6NMB1 481 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 A8MXQ7 604 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 KPNA7A9QM74 516 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 PTGESO14684 152 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 FSCN2O14926 492 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 SPTLC1O15269 473 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 HCRTO43612 131 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 CABYRO75952 493 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 KRT1P04264 644 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 INHAP05111 366 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 RARAP10276 462 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 GHRP10912 638 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 KRT3P12035 628 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 IBSPP21815 317 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 CD52P31358 61 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 CHRNA3P32297 505 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 MLH1P40692 756 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 GPD2P43304 727 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 RGS7P49802 495 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 GSCP56915 257 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 PTK7Q13308 1070 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 NNTQ13423 1086 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 CUL1Q13616 776 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 DHX34Q14147 1143 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms