RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 STILQ15468 1287 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 PKDCCQ504Y2 493 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 LLGL2Q6P1M3 1020 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.98□□□□□ -0.49
VMP1-207ENST00000588131 MMS22LQ6ZRQ5 1243 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 MON1BQ7L1V2 547 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 LRRTM3Q86VH5 581 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 CEP57Q86XR8 500 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 PHF13Q86YI8 300 aaPredicted RBP11.98□□□□□ -0.49
VMP1-207ENST00000588131 MCOLN2Q8IZK6 566 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 FUKQ8N0W3 1084 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 THEM5Q8N1Q8 247 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 FIBCD1Q8N539 461 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 MYLPFQ96A32 169 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 HNRNPABQ99729 332 aaKnown RBP11.98□□□□□ -0.49
VMP1-207ENST00000588131 C11orf70Q9BRQ4 267 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 B3GNT5Q9BYG0 378 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 DNAI2Q9GZS0 605 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 TJP2Q9UDY2 1190 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 CHORDC1Q9UHD1 332 aaPredicted RBP11.98□□□□□ -0.49
VMP1-207ENST00000588131 GTF3C4Q9UKN8 822 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 GUCA1BQ9UMX6 200 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 INSL6Q9Y581 213 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 PAXBP1Q9Y5B6 917 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 NR2E3Q9Y5X4 410 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 NLRC5Q86WI3 1866 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 MACROD2A1Z1Q3 448 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 TULP2O00295 520 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 BUB1O43683 1085 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 KRT86O43790 486 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 TLL1O43897 1013 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 MOCS3O95396 460 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 MMP8P22894 467 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 RABGGTBP53611 331 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 PDE4CQ08493 712 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 SHHQ15465 462 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 PTPN20Q4JDL3 420 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 FAM109BQ6ICB4 259 aaPredicted RBP11.97□□□□□ -0.49
VMP1-207ENST00000588131 FAM171BQ6P995 826 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 PHLDB2Q86SQ0 1253 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 FAM35AQ86V20 835 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 TXLNBQ8N3L3 684 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 ANKRD52Q8NB46 1076 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 MYCBPAPQ8TBZ2 947 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 CTNNBL1Q8WYA6 563 aaPredicted RBP11.97□□□□□ -0.49
VMP1-207ENST00000588131 ZNF653Q96CK0 615 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 PCED1BQ96HM7 432 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 C16orf45Q96MC5 204 aaPredicted RBP11.97□□□□□ -0.49
VMP1-207ENST00000588131 RAD9AQ99638 391 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 MED10Q9BTT4 135 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 RHOBTB2Q9BYZ6 727 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 TSGA10Q9BZW7 698 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 ZNF518BQ9C0D4 1074 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 ZCWPW1Q9H0M4 648 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
VMP1-207ENST00000588131 RRAGDQ9NQL2 400 aaPredicted RBP11.97□□□□□ -0.49
VMP1-207ENST00000588131 MYO1AQ9UBC5 1043 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 HESX1Q9UBX0 185 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 CEP83Q9Y592 693 aa11.97□□□□□ -0.49
VMP1-207ENST00000588131 BTNL10A8MVZ5 291 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 GRXCR1A8MXD5 290 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 BEST1O76090 585 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 ARHGEF15O94989 841 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 CYP1A2P05177 515 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 RRM1P23921 792 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 RGS7P49802 495 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 CACNA2D1P54289 1103 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 GPC5P78333 572 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 TSPY1Q01534 308 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 PDCLQ13371 301 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 CTXN3Q4LDR2 81 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 CYP4A22Q5TCH4 519 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 ZNF280DQ6N043 979 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 PRSS55Q6UWB4 352 aaPredicted RBP11.96□□□□□ -0.49
VMP1-207ENST00000588131 RSPO2Q6UXX9 243 aaPredicted RBP11.96□□□□□ -0.49
VMP1-207ENST00000588131 ERICH1Q86X53 443 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 TMEM169Q96HH4 297 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 RNPC3Q96LT9 517 aaKnown RBP11.96□□□□□ -0.49
VMP1-207ENST00000588131 CPXM1Q96SM3 734 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 TTPALQ9BTX7 342 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 HERC2P3Q9BVR0 1158 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 OSGEPQ9NPF4 335 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 KRT82Q9NSB4 513 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 TMEM30AQ9NV96 361 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 SPG21Q9NZD8 308 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 ADAM22Q9P0K1 906 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 CNOT8Q9UFF9 292 aaKnown RBP11.96□□□□□ -0.49
VMP1-207ENST00000588131 COG5Q9UP83 839 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 CAPN6Q9Y6Q1 641 aa11.96□□□□□ -0.49
VMP1-207ENST00000588131 GBF1Q92538 1859 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 PLXNA4Q9HCM2 1894 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 A0A0A6YYK5 440 aaPredicted RBP11.95□□□□□ -0.5
VMP1-207ENST00000588131 PIK3R2O00459 728 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 FANCGO15287 622 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 TBC1D4O60343 1298 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 GABBR2O75899 941 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 SOD2P04179 222 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 ERBB2P04626 1255 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 SETSIPP0DME0 302 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms