RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTPRS-205ENST00000588012 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
PTPRS-205ENST00000588012 MRPL1Q9BYD6 325 aaKnown RBP16.59■□□□□ 0.25
PTPRS-205ENST00000588012 STN1Q9H668 368 aaKnown RBP16.59■□□□□ 0.25
PTPRS-205ENST00000588012 RNASEH1O60930 286 aaKnown RBP16.58■□□□□ 0.25
PTPRS-205ENST00000588012 ZNF280DQ6N043 979 aa16.58■□□□□ 0.25
PTPRS-205ENST00000588012 EFL1Q7Z2Z2 1120 aaKnown RBP16.58■□□□□ 0.25
PTPRS-205ENST00000588012 E2F8A0AVK6 867 aa16.58■□□□□ 0.25
PTPRS-205ENST00000588012 SRP72O76094 671 aaKnown RBP16.58■□□□□ 0.25
PTPRS-205ENST00000588012 F9P00740 461 aa16.58■□□□□ 0.25
PTPRS-205ENST00000588012 BCAT1P54687 386 aa16.58■□□□□ 0.25
PTPRS-205ENST00000588012 LRRC74AQ0VAA2 488 aa16.58■□□□□ 0.25
PTPRS-205ENST00000588012 PRUNE1Q86TP1 453 aa16.58■□□□□ 0.25
PTPRS-205ENST00000588012 CBWD2Q8IUF1 395 aa16.58■□□□□ 0.25
PTPRS-205ENST00000588012 HERC6Q8IVU3 1022 aa16.58■□□□□ 0.25
PTPRS-205ENST00000588012 C4orf33Q8N1A6 199 aa16.58■□□□□ 0.25
PTPRS-205ENST00000588012 NUP93Q8N1F7 819 aa16.58■□□□□ 0.25
PTPRS-205ENST00000588012 ZNF669Q96BR6 464 aaPredicted RBP16.58■□□□□ 0.25
PTPRS-205ENST00000588012 FRMD8P1Q9BZ68 369 aaPredicted RBP16.58■□□□□ 0.25
PTPRS-205ENST00000588012 GTPBP10A4D1E9 387 aaKnown RBP16.58■□□□□ 0.24
PTPRS-205ENST00000588012 FBXO21O94952 628 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 MIB1Q86YT6 1006 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 RIC8BQ9NVN3 520 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 H2AFYO75367 372 aaKnown RBP16.58■□□□□ 0.24
PTPRS-205ENST00000588012 OXCT1P55809 520 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 TTLL9Q3SXZ7 439 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 MDH1BQ5I0G3 518 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 WDR49Q8IV35 697 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 ERGIC2Q96RQ1 377 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 FRMD8Q9BZ67 464 aaPredicted RBP16.58■□□□□ 0.24
PTPRS-205ENST00000588012 RANBP17Q9H2T7 1088 aaKnown RBP16.58■□□□□ 0.24
PTPRS-205ENST00000588012 CHST12Q9NRB3 414 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 GTF3C4Q9UKN8 822 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 MEGF6O75095 1541 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 NFIBO00712 420 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 DDNO94850 711 aaPredicted RBP16.58■□□□□ 0.24
PTPRS-205ENST00000588012 SGPL1O95470 568 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 CKMP06732 381 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 HLA-DPA1P20036 260 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 VSNL1P62760 191 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 STX19Q8N4C7 294 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 ACSF2Q96CM8 615 aaPredicted RBP16.58■□□□□ 0.24
PTPRS-205ENST00000588012 PKD2L2Q9NZM6 624 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 DPP7Q9UHL4 492 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
PTPRS-205ENST00000588012 HERVK_113P62684 666 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 VPS33BQ9H267 617 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 RBM12Q9NTZ6 932 aaKnown RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 DBR1Q9UK59 544 aaKnown RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 CFAP73A6NFT4 308 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 GYPCP04921 128 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 CHN1P15882 459 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 CARSP49589 748 aaKnown RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 KDSRQ06136 332 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 DEFB128Q7Z7B8 93 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 C4orf19Q8IY42 314 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 SYTL5Q8TDW5 730 aaPredicted RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 STAMBPL1Q96FJ0 436 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 TMEM161AQ9NX61 479 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 ARHGAP26Q9UNA1 814 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 DCCP43146 1447 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 PMPCBO75439 489 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 PON1P27169 355 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 PGM1P36871 562 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 RAP1GAPP47736 663 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 CCZ1BP86790 482 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 CCZ1P86791 482 aaPredicted RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 MAP3K10Q02779 954 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 PGM5Q15124 567 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 NPHS2Q9NP85 383 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 TRMT6Q9UJA5 497 aaKnown RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 CXCL11O14625 94 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 LZTS3O60299 673 aaPredicted RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 ALDH1A2O94788 518 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 FGFR2P21802 821 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 COILP38432 576 aaPredicted RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 RAB27AP51159 221 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 HPCAP84074 193 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 GIT2Q14161 759 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 TC2NQ8N9U0 490 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 CATSPER1Q8NEC5 780 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 BLOC1S5Q8TDH9 187 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 TMA16Q96EY4 203 aaKnown RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 THAP2Q9H0W7 228 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 GRID1Q9ULK0 1009 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 TRAF3IP3Q9Y228 551 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 ARL2BPQ9Y2Y0 163 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 AAR2Q9Y312 384 aaKnown RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 FAM47DPA6NHR8 397 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 MAP3K7CLP57077 242 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 GRIN1Q05586 938 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 HASPINQ8TF76 798 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 EMILIN2Q9BXX0 1053 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 IRX2Q9BZI1 471 aaPredicted RBP16.57■□□□□ 0.24
PTPRS-205ENST00000588012 MRGBPQ9NV56 204 aa16.57■□□□□ 0.24
PTPRS-205ENST00000588012 SALL1Q9NSC2 1324 aa16.56■□□□□ 0.24
PTPRS-205ENST00000588012 PRR23AA6NEV1 266 aa16.56■□□□□ 0.24
PTPRS-205ENST00000588012 RAD51CO43502 376 aa16.56■□□□□ 0.24
PTPRS-205ENST00000588012 SOAT2O75908 522 aa16.56■□□□□ 0.24
PTPRS-205ENST00000588012 HSPA1AP0DMV8 641 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms