RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 ZNF263O14978 683 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 KIF20AO95235 890 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 BDNFP23560 247 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CDC25CP30307 473 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 RAP1GAPP47736 663 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CLDN10P78369 228 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CYP27A1Q02318 531 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 MDH1BQ5I0G3 518 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 C1orf220Q5T0J3 134 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TXNDC8Q6A555 127 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 YAF2Q8IY57 180 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ENGASEQ8NFI3 743 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TTC8Q8TAM2 541 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ZFYVE19Q96K21 471 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 GCNAQ96QF7 691 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ABCB6Q9NP58 842 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 DLGAP2Q9P1A6 1054 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 FRMD4BQ9Y2L6 1034 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TACC1O75410 805 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 PRAMEF12O95522 483 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CSH1P0DML2 217 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CSH2P0DML3 217 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 PTPN1P18031 435 aaKnown RBP21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 NR2F2P24468 414 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ATICP31939 592 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 NCOA4Q13772 614 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ANGPT1Q15389 498 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 GUF1Q8N442 669 aaKnown RBP21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 MAB21L3Q8N8X9 362 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TMC2Q8TDI7 906 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TMEM174Q8WUU8 243 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 DEPDC1BQ8WUY9 529 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 IRF7Q92985 503 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SYAP1Q96A49 352 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 EEF2KMTQ96G04 330 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SMYD3Q9H7B4 428 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 LTB4R2Q9NPC1 389 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CACNA1HO95180 2353 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 DENND4CQ5VZ89 1909 aa21.41■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ZNF638Q14966 1978 aaKnown RBP21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TICRRQ7Z2Z1 1910 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 A8MXQ7 604 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 AKAP3O75969 853 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 STAU1O95793 577 aaKnown RBP21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 GRIK1P39086 918 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 VAMP7P51809 220 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 AP3M2P53677 418 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ADAM9Q13443 819 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ZNF699Q32M78 642 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CFAP221Q4G0U5 840 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ZNF667Q5HYK9 610 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SCARA5Q6ZMJ2 495 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 C4orf50Q6ZRC1 276 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SV2AQ7L0J3 742 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 MYCBPAPQ8TBZ2 947 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 DNASE1L2Q92874 299 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 E2F7Q96AV8 911 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 PCED1BQ96HM7 432 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SDCBP2Q9H190 292 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 IRF2BPLQ9H1B7 796 aa21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 NDRG2Q9UN36 371 aaKnown RBP21.4■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CLDN5O00501 218 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 NOL4O94818 638 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TRIM49P0CI25 452 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TRIM49CP0CI26 452 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TARSP26639 723 aaKnown RBP21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ISM2Q6H9L7 571 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 SPOPLQ6IQ16 392 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ZNF852Q6ZMS4 543 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 FUBP3Q96I24 572 aaKnown RBP eCLIP21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CYP2S1Q96SQ9 504 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MMRN2Q9H8L6 949 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MIA3Q5JRA6 1907 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CACNA1IQ9P0X4 2223 aa21.39■■□□□ 1.01
TRAPPC6A-203ENST00000587818 FAM163BP0C2L3 166 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 PRCPP42785 496 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MAGEA11P43364 429 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 SOX9P48436 509 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 FAM160A1Q05DH4 1040 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ZACNQ401N2 412 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 FAM186BQ8IYM0 893 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CMTM8Q8IZV2 173 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CCDC34Q96HJ3 373 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 B3GNT5Q9BYG0 378 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CCL26Q9Y258 94 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 PCDHA5Q9Y5H7 936 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 PIAS3Q9Y6X2 628 aa21.38■■□□□ 1.01
TRAPPC6A-203ENST00000587818 F5P12259 2224 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ARNTLO00327 626 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CHADO15335 359 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 GADD45BO75293 160 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TADA3O75528 432 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 HLA-DRAP01903 254 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 RPL13P26373 211 aaKnown RBP21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 GCLMP48507 274 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CACNA2D1P54289 1103 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 USP46P62068 366 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 PPP3CAQ08209 521 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 FCHO2Q0JRZ9 810 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ORC1Q13415 861 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms