RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 AP3M2P53677 418 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 FSTL1Q12841 308 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 ZC3H12AQ5D1E8 599 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 GPAT2Q6NUI2 795 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 LVRNQ6Q4G3 990 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 POLNQ7Z5Q5 900 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 ZNF75CPQ92670 426 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 ZNF570Q96NI8 536 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 ADAM33Q9BZ11 813 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 CYLDQ9NQC7 956 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 CISHQ9NSE2 258 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 CLUHO75153 1309 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 ZWINTO95229 277 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 ATG7O95352 703 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 T-ENOLP0DO92 83 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 FGFR1P11362 822 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 HARSP12081 509 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 EIF4BP23588 611 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 CTCFP49711 727 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 NAA25Q14CX7 972 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 ZNF394Q53GI3 561 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 OTOAQ7RTW8 1153 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 WDR49Q8IV35 697 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 PPIL6Q8IXY8 311 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 PYROXD1Q8WU10 500 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 PHACTR1Q9C0D0 580 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 BATF3Q9NR55 127 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 SAE1Q9UBE0 346 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 EFR3BQ9Y2G0 817 aa17.72■□□□□ 0.43
PRKCSH-205ENST00000587327 CDH5P33151 784 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-205ENST00000587327 PHBP35232 272 aa17.71■□□□□ 0.43
PRKCSH-205ENST00000587327 MYL6P60660 151 aa17.71■□□□□ 0.43
PRKCSH-205ENST00000587327 TFDP1Q14186 410 aa17.71■□□□□ 0.43
PRKCSH-205ENST00000587327 SPDYAQ5MJ70 313 aa17.71■□□□□ 0.43
PRKCSH-205ENST00000587327 BRSK2Q8IWQ3 736 aa17.71■□□□□ 0.43
PRKCSH-205ENST00000587327 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
PRKCSH-205ENST00000587327 NIFKQ9BYG3 293 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-205ENST00000587327 MAF1Q9H063 256 aa17.71■□□□□ 0.43
PRKCSH-205ENST00000587327 SLC5A4Q9NY91 659 aa17.71■□□□□ 0.43
PRKCSH-205ENST00000587327 SSTR1P30872 391 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 TNFSF9P41273 254 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 CNTN2Q02246 1040 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 GAD2Q05329 585 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 CYP4A22Q5TCH4 519 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 ADGRD1Q6QNK2 874 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 KIRREL3Q8IZU9 778 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 ATP11CQ8NB49 1132 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 ACTL9Q8TC94 416 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 CPT1BQ92523 772 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 SLC7A6OSQ96CW6 309 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 DHRS4Q9BTZ2 278 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 MTMR12Q9C0I1 747 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 NIF3L1Q9GZT8 377 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 ZMYND8Q9ULU4 1186 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 PCDHGC3Q9UN70 934 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 AGTPBP1Q9UPW5 1226 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 ADCY3O60266 1144 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 FAM189A1O60320 539 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 RASSF2P50749 326 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 GDF10P55107 478 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 ARL4CP56559 192 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 DYNLT1P63172 113 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 OTUD4Q01804 1114 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 GRM1Q13255 1194 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 MSS51Q4VC12 460 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 SLC45A4Q5BKX6 768 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 ANKRD20A2Q5SQ80 823 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 FNBP1LQ5T0N5 605 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 ANKRD20A1Q5TYW2 823 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 ANKRD20A3Q5VUR7 823 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 ANKRD22Q5VYY1 191 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 C3orf62Q6ZUJ4 267 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 NAT8LQ8N9F0 302 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 CHST13Q8NET6 341 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 FBXO41Q8TF61 875 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 TFAP2BQ92481 460 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 FRMD8P1Q9BZ68 369 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 SIP14410 1827 aa17.7■□□□□ 0.42
PRKCSH-205ENST00000587327 SBF1O95248 1867 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 TTLL13PA6NNM8 815 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 RFC1P35251 1148 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 PSMC4P43686 418 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 SLC25A11Q02978 314 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 CAPSQ13938 189 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 EFTUD2Q15029 972 aaKnown RBP eCLIP17.69■□□□□ 0.427e-7■■■■■ 35.5
PRKCSH-205ENST00000587327 SGSM1Q2NKQ1 1148 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 ZPBP2Q6X784 338 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 LBX2Q6XYB7 198 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 TTC13Q8NBP0 860 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 TBC1D10AQ9BXI6 508 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 ACSS3Q9H6R3 686 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 C10orf88Q9H8K7 445 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 BTBD7Q9P203 1132 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 CEP83Q9Y592 693 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 C2CD2LO14523 706 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 TRAFD1O14545 582 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 CST8O60676 142 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 WEE2P0C1S8 567 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 ICAM3P32942 547 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 STXBP2Q15833 593 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms