RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 AVENQ9NQS1 362 aaPredicted RBP10.79□□□□□ -0.68
APOC1-201ENST00000586638 FAM49BQ9NUQ9 324 aa10.79□□□□□ -0.68
APOC1-201ENST00000586638 SLC38A7Q9NVC3 462 aa10.79□□□□□ -0.68
APOC1-201ENST00000586638 LMCD1Q9NZU5 365 aa10.79□□□□□ -0.68
APOC1-201ENST00000586638 ADAM22Q9P0K1 906 aa10.79□□□□□ -0.68
APOC1-201ENST00000586638 TJP2Q9UDY2 1190 aa10.79□□□□□ -0.68
APOC1-201ENST00000586638 CYTH4Q9UIA0 394 aa10.79□□□□□ -0.68
APOC1-201ENST00000586638 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.79□□□□□ -0.68
APOC1-201ENST00000586638 HCN4Q9Y3Q4 1203 aa10.79□□□□□ -0.68
APOC1-201ENST00000586638 A0A0U1RQF3 1178 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 KPNA7A9QM74 516 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 C9IYK1 514 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 O00370 1275 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 PDE2AO00408 941 aaPredicted RBP10.78□□□□□ -0.68
APOC1-201ENST00000586638 ZNF623O75123 536 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 MYBL1P10243 752 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 VDRP11473 427 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 TCP1P17987 556 aaKnown RBP10.78□□□□□ -0.68
APOC1-201ENST00000586638 CDH5P33151 784 aaPredicted RBP10.78□□□□□ -0.68
APOC1-201ENST00000586638 C1QBPQ07021 282 aaKnown RBP10.78□□□□□ -0.68
APOC1-201ENST00000586638 CKAP4Q07065 602 aaKnown RBP10.78□□□□□ -0.68
APOC1-201ENST00000586638 C2orf54Q08AI8 447 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 GRIK3Q13003 919 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 MESDQ14696 234 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 TCEAL1Q15170 157 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 RPS6KA1Q15418 735 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 PTPN20Q4JDL3 420 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 CYP4A22Q5TCH4 519 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 SMYD5Q6GMV2 418 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 ACOT1Q86TX2 421 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 ZNF598Q86UK7 904 aaKnown RBP10.78□□□□□ -0.68
APOC1-201ENST00000586638 RTN4RL1Q86UN2 441 aaPredicted RBP10.78□□□□□ -0.68
APOC1-201ENST00000586638 ADGRF2Q8IZF7 708 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 TTC39CQ8N584 583 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 WDTC1Q8N5D0 677 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 CEP112Q8N8E3 955 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 C3orf58Q8NDZ4 430 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 OR6B3Q8NGW1 331 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 PGBD4Q96DM1 585 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 HEXIM2Q96MH2 286 aaKnown RBP10.78□□□□□ -0.68
APOC1-201ENST00000586638 LPIN3Q9BQK8 851 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 NT5C1AQ9BXI3 368 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 TRIM7Q9C029 511 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 ABCB6Q9NP58 842 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 RGS18Q9NS28 235 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 UVRAGQ9P2Y5 699 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 ANAPC7Q9UJX3 599 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 AMFRQ9UKV5 643 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 CEP83Q9Y592 693 aa10.78□□□□□ -0.68
APOC1-201ENST00000586638 MYO9BQ13459 2157 aa10.77□□□□□ -0.68
APOC1-201ENST00000586638 MUC6Q6W4X9 2439 aa10.77□□□□□ -0.68
APOC1-201ENST00000586638 CTAGE15A4D2H0 777 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 KCNK3O14649 394 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 DDX3YO15523 660 aaKnown RBP10.77□□□□□ -0.69
APOC1-201ENST00000586638 LPXNO60711 386 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 GPR37L1O60883 481 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 HUS1O60921 280 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 PARNO95453 639 aaKnown RBP10.77□□□□□ -0.69
APOC1-201ENST00000586638 CALB1P05937 261 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 CTAGE8P0CG41 777 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 SKIP12755 728 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 MMP8P22894 467 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 MARCKSL1P49006 195 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 CLCNKBP51801 687 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 LILRA4P59901 499 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 WDR5P61964 334 aaKnown RBP10.77□□□□□ -0.69
APOC1-201ENST00000586638 GPNMBQ14956 572 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 CCDC142Q17RM4 750 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 PPP1R26Q5T8A7 1209 aaPredicted RBP10.77□□□□□ -0.69
APOC1-201ENST00000586638 PPP1R2P3Q6NXS1 205 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 SPRED2Q7Z698 418 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 CTAGE6Q86UF2 777 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 CTAGE4Q8IX94 777 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 PDCL2Q8N4E4 241 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 APPL2Q8NEU8 664 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 UBA3Q8TBC4 463 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 GOLGA1Q92805 767 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 RAD9AQ99638 391 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 PAAF1Q9BRP4 392 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 SNX25Q9H3E2 840 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 FAM124BQ9H5Z6 455 aaPredicted RBP10.77□□□□□ -0.69
APOC1-201ENST00000586638 RNF216Q9NWF9 866 aaPredicted RBP10.77□□□□□ -0.69
APOC1-201ENST00000586638 GDAP2Q9NXN4 497 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 CHD7Q9P2D1 2997 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 TSPAN16Q9UKR8 245 aa10.77□□□□□ -0.69
APOC1-201ENST00000586638 FNDC1Q4ZHG4 1894 aaPredicted RBP10.76□□□□□ -0.69
APOC1-201ENST00000586638 LCHNA4D1U4 455 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 EFCAB8A8MWE9 144 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 A8MXQ7 604 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 PI4K2BG5E9Z4 385 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 GOLGA8SH3BPF8 625 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 DYNC1I1O14576 645 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 B4GALT3O60512 393 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 ERBB2P04626 1255 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 PDGFRBP09619 1106 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 CCDC130P13994 396 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 PRLRP16471 622 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 COMTP21964 271 aa10.76□□□□□ -0.69
APOC1-201ENST00000586638 WARSP23381 471 aaKnown RBP10.76□□□□□ -0.69
APOC1-201ENST00000586638 LMO2P25791 158 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms