RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 ACLYP53396 1101 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 HLTFQ14527 1009 aaKnown RBP eCLIP23.5■■□□□ 1.35
CIRBP-208ENST00000586548 FAM26DQ5JW98 314 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 TTC27Q6P3X3 843 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 MRPL10Q7Z7H8 261 aaKnown RBP23.5■■□□□ 1.35
CIRBP-208ENST00000586548 RCOR2Q8IZ40 523 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 CRYBG2Q8N1P7 616 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 MREGQ8N565 214 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 TOP6BLQ8N6T0 577 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 JOSD2Q8TAC2 188 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 RBM41Q96IZ5 413 aaKnown RBP23.5■■□□□ 1.35
CIRBP-208ENST00000586548 ZFP42Q96MM3 310 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 ERP44Q9BS26 406 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 SNX25Q9H3E2 840 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 HESX1Q9UBX0 185 aa23.5■■□□□ 1.35
CIRBP-208ENST00000586548 PODXLO00592 558 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 DAPK3O43293 454 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 HUS1O60921 280 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 GJC1P36383 396 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 RAB27AP51159 221 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 LILRA4P59901 499 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 DUPD1Q68J44 220 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 TRAIPQ9BWF2 469 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 ST7Q9NRC1 585 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 DDX56Q9NY93 547 aaKnown RBP23.49■■□□□ 1.35
CIRBP-208ENST00000586548 PADI3Q9ULW8 664 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 NOD1Q9Y239 953 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 GIT1Q9Y2X7 761 aa23.49■■□□□ 1.35
CIRBP-208ENST00000586548 MOXD2PA6NHM9 499 aa23.48■■□□□ 1.35
CIRBP-208ENST00000586548 FAM163BP0C2L3 166 aa23.48■■□□□ 1.35
CIRBP-208ENST00000586548 FAM153BP0C7A2 387 aa23.48■■□□□ 1.35
CIRBP-208ENST00000586548 FGFR1P11362 822 aa23.48■■□□□ 1.35
CIRBP-208ENST00000586548 OAS2P29728 719 aaKnown RBP23.48■■□□□ 1.35
CIRBP-208ENST00000586548 GNL1P36915 607 aaPredicted RBP23.48■■□□□ 1.35
CIRBP-208ENST00000586548 KLF1Q13351 362 aaPredicted RBP23.48■■□□□ 1.35
CIRBP-208ENST00000586548 TRIM71Q2Q1W2 868 aaKnown RBP23.48■■□□□ 1.35
CIRBP-208ENST00000586548 FAM153CQ494X1 144 aa23.48■■□□□ 1.35
CIRBP-208ENST00000586548 POLNQ7Z5Q5 900 aa23.48■■□□□ 1.35
CIRBP-208ENST00000586548 TTC30AQ86WT1 665 aa23.48■■□□□ 1.35
CIRBP-208ENST00000586548 DDX42Q86XP3 938 aaKnown RBP eCLIP23.48■■□□□ 1.352e-6■■■□□ 17.9
CIRBP-208ENST00000586548 TSEN34Q9BSV6 310 aaKnown RBP23.48■■□□□ 1.35
CIRBP-208ENST00000586548 OSBPL8Q9BZF1 889 aa23.48■■□□□ 1.35
CIRBP-208ENST00000586548 FAM49BQ9NUQ9 324 aa23.48■■□□□ 1.35
CIRBP-208ENST00000586548 FAM153AQ9UHL3 310 aa23.48■■□□□ 1.35
CIRBP-208ENST00000586548 MEIS3P2A8K0S8 358 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 H3BQF6 201 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 CAND2O75155 1236 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 GHRP10912 638 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 RALAP11233 206 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 TCF4P15884 667 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 WARSP23381 471 aaKnown RBP23.47■■□□□ 1.35
CIRBP-208ENST00000586548 CD52P31358 61 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 MLH1P40692 756 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 DRG2P55039 364 aaKnown RBP23.47■■□□□ 1.35
CIRBP-208ENST00000586548 ACAP1Q15027 740 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 ADGRF2Q8IZF7 708 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 GSTCDQ8NEC7 633 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 SLCO2A1Q92959 643 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 DPEP3Q9H4B8 488 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 MED4Q9NPJ6 270 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 HOMER3Q9NSC5 361 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 TRMT13Q9NUP7 481 aaKnown RBP23.47■■□□□ 1.35
CIRBP-208ENST00000586548 SQORQ9Y6N5 450 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 E5RJQ4 531 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 ZNF623O75123 536 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 KRT1P04264 644 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 THP07101 528 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 SNX16P57768 344 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 COPS2P61201 443 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 DSC3Q14574 896 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 LPIN1Q14693 890 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 FAM102AQ5T9C2 384 aaPredicted RBP23.47■■□□□ 1.35
CIRBP-208ENST00000586548 CCDC105Q8IYK2 499 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 STK32AQ8WU08 396 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 SLITRK1Q96PX8 696 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 GAD1Q99259 594 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 HERPUD2Q9BSE4 406 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 SLC4A5Q9BY07 1137 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 TSPYL2Q9H2G4 693 aaPredicted RBP23.47■■□□□ 1.35
CIRBP-208ENST00000586548 DPH5Q9H2P9 285 aa23.47■■□□□ 1.35
CIRBP-208ENST00000586548 PTPN7P35236 360 aa23.46■■□□□ 1.35
CIRBP-208ENST00000586548 C1QTNF8P60827 252 aa23.46■■□□□ 1.35
CIRBP-208ENST00000586548 HSP90B2PQ58FF3 399 aa23.46■■□□□ 1.35
CIRBP-208ENST00000586548 SLAIN1Q8ND83 568 aa23.46■■□□□ 1.35
CIRBP-208ENST00000586548 SLC35F5Q8WV83 523 aa23.46■■□□□ 1.35
CIRBP-208ENST00000586548 GLT1D1Q96MS3 346 aa23.46■■□□□ 1.35
CIRBP-208ENST00000586548 OSBPL7Q9BZF2 842 aa23.46■■□□□ 1.35
CIRBP-208ENST00000586548 FRMPD3Q5JV73 1810 aa23.46■■□□□ 1.35
CIRBP-208ENST00000586548 ARL5CA6NH57 179 aa23.45■■□□□ 1.34
CIRBP-208ENST00000586548 LRCH4O75427 683 aa23.45■■□□□ 1.34
CIRBP-208ENST00000586548 CAPN15O75808 1086 aa23.45■■□□□ 1.34
CIRBP-208ENST00000586548 INHAP05111 366 aa23.45■■□□□ 1.34
CIRBP-208ENST00000586548 PDGFRBP09619 1106 aa23.45■■□□□ 1.34
CIRBP-208ENST00000586548 GBP1P32455 592 aa23.45■■□□□ 1.34
CIRBP-208ENST00000586548 ARHGEF6Q15052 776 aa23.45■■□□□ 1.34
CIRBP-208ENST00000586548 LLGL1Q15334 1064 aa23.45■■□□□ 1.34
CIRBP-208ENST00000586548 HADHQ16836 314 aaKnown RBP23.45■■□□□ 1.34
CIRBP-208ENST00000586548 ALS2CLQ60I27 953 aa23.45■■□□□ 1.34
CIRBP-208ENST00000586548 OR6B2Q6IFH4 312 aa23.45■■□□□ 1.34
CIRBP-208ENST00000586548 AGMOQ6ZNB7 445 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms