RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 STAU1O95793 577 aaKnown RBP23.16■■□□□ 1.3
CIRBP-205ENST00000585913 PDGFRBP09619 1106 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 ATICP31939 592 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 AP3M2P53677 418 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 NLRP12P59046 1061 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 FCHO2Q0JRZ9 810 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 DPYDQ12882 1025 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 C1orf210Q8IVY1 113 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 SCN4BQ8IWT1 228 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 PLEKHO2Q8TD55 490 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 PARD3BQ8TEW8 1205 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 TMEM174Q8WUU8 243 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 MYLPFQ96A32 169 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 MRPL45Q9BRJ2 306 aaKnown RBP23.16■■□□□ 1.3
CIRBP-205ENST00000585913 OBP2AQ9NY56 170 aa23.16■■□□□ 1.3
CIRBP-205ENST00000585913 MAGEC2Q9UBF1 373 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-205ENST00000585913 CACNA1HO95180 2353 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 LRRIQ3A6PVS8 624 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-205ENST00000585913 GFRA3O60609 400 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 TACC1O75410 805 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 F11P03951 625 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 DDX6P26196 483 aaKnown RBP eCLIP23.15■■□□□ 1.36e-15■■□□□ 11.4
CIRBP-205ENST00000585913 WEE1P30291 646 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 GNL1P36915 607 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-205ENST00000585913 MAGEA9P43362 315 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 MYL6P60660 151 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 NUCB2P80303 420 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 FRMD5Q7Z6J6 570 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 OR6B3Q8NGW1 331 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 MRPS31Q92665 395 aaKnown RBP23.15■■□□□ 1.3
CIRBP-205ENST00000585913 CRTAC1Q9NQ79 661 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 NXF1Q9UBU9 619 aaKnown RBP23.15■■□□□ 1.3
CIRBP-205ENST00000585913 PIAS3Q9Y6X2 628 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 DENND4CQ5VZ89 1909 aa23.15■■□□□ 1.3
CIRBP-205ENST00000585913 OBSL1O75147 1896 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 SLC38A8A6NNN8 435 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 NOL4O94818 638 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 PRAMEF12O95522 483 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 FAM163BP0C2L3 166 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 MAGEA11P43364 429 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 CYP27A1Q02318 531 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 ARHGAP29Q52LW3 1261 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 TDRD10Q5VZ19 366 aaKnown RBP23.14■■□□□ 1.29
CIRBP-205ENST00000585913 CEP135Q66GS9 1140 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 TMEM150AQ86TG1 271 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 CMTM8Q8IZV2 173 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 MAB21L3Q8N8X9 362 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 SLC46A2Q9BY10 475 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 SPATA6Q9NWH7 488 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-205ENST00000585913 NDRG2Q9UN36 371 aaKnown RBP23.14■■□□□ 1.29
CIRBP-205ENST00000585913 FRMD4BQ9Y2L6 1034 aa23.14■■□□□ 1.29
CIRBP-205ENST00000585913 GOLGA6L4A6NEF3 574 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 ARNTLO00327 626 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 AVPR1AP37288 418 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 CLDN10P78369 228 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 KCNB1Q14721 858 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 ZNF699Q32M78 642 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 VSTM1Q6UX27 236 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 MYCBPAPQ8TBZ2 947 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 BPIFB1Q8TDL5 484 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 FAM3CQ92520 227 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 TRMT2BQ96GJ1 504 aaKnown RBP23.13■■□□□ 1.29
CIRBP-205ENST00000585913 XYLT2Q9H1B5 865 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 MAPK8IP1Q9UQF2 711 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 TRAF3IP3Q9Y228 551 aa23.13■■□□□ 1.29
CIRBP-205ENST00000585913 PATJQ8NI35 1801 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 SHISA7A6NL88 538 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 C4BPAP04003 597 aaKnown RBP23.12■■□□□ 1.29
CIRBP-205ENST00000585913 BDNFP23560 247 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 GRIK1P39086 918 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 KPNA1P52294 538 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-205ENST00000585913 NCOA4Q13772 614 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 MDH1BQ5I0G3 518 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 CELF5Q8N6W0 485 aaKnown RBP23.12■■□□□ 1.29
CIRBP-205ENST00000585913 TMC2Q8TDI7 906 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 NKD2Q969F2 451 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-205ENST00000585913 CLDN23Q96B33 292 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 MSANTD3Q96H12 275 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 PCED1BQ96HM7 432 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 MYRFLQ96LU7 910 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 LRRC3BQ96PB8 259 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 SMG9Q9H0W8 520 aaKnown RBP23.12■■□□□ 1.29
CIRBP-205ENST00000585913 VRTNQ9H8Y1 702 aa23.12■■□□□ 1.29
CIRBP-205ENST00000585913 THG1LQ9NWX6 298 aaKnown RBP23.12■■□□□ 1.29
CIRBP-205ENST00000585913 SOBPA7XYQ1 873 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 A8MXQ7 604 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 LAMTOR5O43504 91 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 NR2F2P24468 414 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 ANXA13P27216 316 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 RPS9P46781 194 aaKnown RBP23.11■■□□□ 1.29
CIRBP-205ENST00000585913 MLLT6P55198 1093 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-205ENST00000585913 DLG4P78352 724 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 PLCB2Q00722 1185 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 ZNF667Q5HYK9 610 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 TXNDC8Q6A555 127 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 GUF1Q8N442 669 aaKnown RBP23.11■■□□□ 1.29
CIRBP-205ENST00000585913 ZFYVE19Q96K21 471 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 C8orf33Q9H7E9 229 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-205ENST00000585913 NME7Q9Y5B8 376 aa23.11■■□□□ 1.29
CIRBP-205ENST00000585913 USP34Q70CQ2 3546 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms