RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, human

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-222	ENST00000585867	FAM163B	P0C2L3	166 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	CTSA	P10619	480 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	RAP1GAP	P47736	663 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	GALC	P54803	685 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	DSG1	Q02413	1049 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	YWHAH	Q04917	246 aa	Predicted RBP	18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	CAMK1	Q14012	370 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	VARS2	Q5ST30	1063 aa	Known RBP	18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	KIAA0319	Q5VV43	1072 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	LIMS2	Q7Z4I7	341 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	TMEM86A	Q8N2M4	240 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	MICAL1	Q8TDZ2	1067 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	RIN2	Q8WYP3	895 aa	Predicted RBP	18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	TMEM176A	Q96HP8	235 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	PCDHB18P	Q96TA0	734 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	TCF25	Q9BQ70	676 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	MRPL45	Q9BRJ2	306 aa	Known RBP	18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	PACSIN1	Q9BY11	444 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	SDCBP2	Q9H190	292 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	CEP83	Q9Y592	693 aa		18.93	■□□□□ 0.62
RBFOX1-222	ENST00000585867	TMCO5B	A8MYB1	307 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	C2CD2L	O14523	706 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	CXCL14	O95715	111 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	LSM8	O95777	96 aa	Known RBP	18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	FTL	P02792	175 aa	Predicted RBP	18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	NAP1L1	P55209	391 aa	Known RBP	18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	OVOS1	Q6IE37	1185 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	ACAD10	Q6JQN1	1059 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	PRSS55	Q6UWB4	352 aa	Predicted RBP	18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	UNC93A	Q86WB7	457 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	ADGRF2	Q8IZF7	708 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	SLC35F6	Q8N357	371 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	ZNF606	Q8WXB4	792 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	AUTS2	Q8WXX7	1259 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	IRX2	Q9BZI1	471 aa	Predicted RBP	18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	LMAN2L	Q9H0V9	348 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	ENTPD7	Q9NQZ7	604 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	MRPL17	Q9NRX2	175 aa	Known RBP	18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	PCDHGC3	Q9UN70	934 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	SSX2IP	Q9Y2D8	614 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	VWA8	A3KMH1	1905 aa		18.92	■□□□□ 0.62
RBFOX1-222	ENST00000585867	CTAGE9	A4FU28	777 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	CYP1A1	P04798	512 aa	Predicted RBP	18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	CA8	P35219	290 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	RAD23B	P54727	409 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	MRPL58	Q14197	206 aa	Known RBP	18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	GRIN2C	Q14957	1233 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	STIL	Q15468	1287 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	ZNF394	Q53GI3	561 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	ANKS3	Q6ZW76	656 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	OSTM1	Q86WC4	334 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	PALB2	Q86YC2	1186 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	RHOT2	Q8IXI1	618 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	OR6B3	Q8NGW1	331 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	KBTBD7	Q8WVZ9	684 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	PIK3R5	Q8WYR1	880 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	RFFL	Q8WZ73	363 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	WDR24	Q96S15	920 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	NT5C1A	Q9BXI3	368 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	ZNF518B	Q9C0D4	1074 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	PRDM12	Q9H4Q4	367 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867	DUSP10	Q9Y6W6	482 aa		18.91	■□□□□ 0.62
RBFOX1-222	ENST00000585867		H7C4K7	107 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	GABRD	O14764	452 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	LPXN	O60711	386 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	OAZ2	O95190	189 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	MYBL1	P10243	752 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	VDR	P11473	427 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	UNG	P13051	313 aa	Predicted RBP	18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	WARS	P23381	471 aa	Known RBP	18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	IRS1	P35568	1242 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	GNL1	P36915	607 aa	Predicted RBP	18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	NSF	P46459	744 aa	Known RBP	18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	LHX1	P48742	406 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	GPC5	P78333	572 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	CENPC	Q03188	943 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	PSMD5	Q16401	504 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	CTXN3	Q4LDR2	81 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	PLPP4	Q5VZY2	271 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	GPR65	Q8IYL9	337 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	THEM5	Q8N1Q8	247 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	SPATA18	Q8TC71	538 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	NAPG	Q99747	312 aa	Predicted RBP	18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	SNX25	Q9H3E2	840 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	NGRN	Q9NPE2	291 aa	Known RBP	18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	DDX43	Q9NXZ2	648 aa	Known RBP	18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	TAS2R14	Q9NYV8	317 aa		18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	LAMA2	P24043	3122 aa	Known RBP	18.9	■□□□□ 0.62
RBFOX1-222	ENST00000585867	FSCN2	O14926	492 aa		18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	LILRB3	O75022	631 aa		18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	MOCS3	O95396	460 aa		18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	CD19	P15391	556 aa		18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	NDST1	P52848	882 aa		18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	TUBB2A	Q13885	445 aa		18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	SMC1A	Q14683	1233 aa	Known RBP	18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	TCEAL1	Q15170	157 aa		18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	PDE12	Q6L8Q7	609 aa	Known RBP	18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	ZNF280D	Q6N043	979 aa		18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	MRPL43	Q8N983	215 aa	Known RBP	18.89	■□□□□ 0.62
RBFOX1-222	ENST00000585867	SLC4A11	Q8NBS3	891 aa		18.89	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms