RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 C2orf42Q9NWW7 574 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 AGO2Q9UKV8 859 aaKnown RBP11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 FRYLO94915 3013 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 TM4SF5O14894 197 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 LETM1O95202 739 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 APBB3O95704 486 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 F11P03951 625 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 IFNAR2P48551 515 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 ACOT2P49753 483 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 GTF2BQ00403 316 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 FAM160A1Q05DH4 1040 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 PLA2G2CQ5R387 149 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 SYT13Q7L8C5 426 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 TMEM130Q8N3G9 435 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 FSIP1Q8NA03 581 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 USP13Q92995 863 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 LSM14BQ9BX40 385 aaKnown RBP11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 TMEM206Q9H813 350 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 ABCB6Q9NP58 842 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 HPS4Q9NQG7 708 aa11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 FBXO2Q9UK22 296 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 MAGED2Q9UNF1 606 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-226ENST00000585026 HUS1O60921 280 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 KCNK5O95279 499 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 CAVIN2O95810 425 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 EGFP01133 1207 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 USP17L7P0C7H9 530 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 PDE6CP51160 858 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 GALK1P51570 392 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 MYL7Q01449 175 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 CCDC6Q16204 474 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 PLK5Q496M5 336 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 USP39Q53GS9 565 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 TXNDC8Q6A555 127 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 TRIM68Q6AZZ1 485 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 PKN3Q6P5Z2 889 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 LRRTM3Q86VH5 581 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 CACTINQ8WUQ7 758 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 POMGNT1Q8WZA1 660 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 CD101Q93033 1021 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 ATP2A3Q93084 1043 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 HVCN1Q96D96 273 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 ACBD6Q9BR61 282 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 PI4K2AQ9BTU6 479 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 ST6GALNAC4Q9H4F1 302 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 DUS2Q9NX74 493 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 TMEM63CQ9P1W3 806 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 EBF1Q9UH73 591 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 EXOC7Q9UPT5 735 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 HPSEQ9Y251 543 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 R3HCC1Q9Y3T6 440 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 STYXL1Q9Y6J8 313 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 SDK1Q7Z5N4 2213 aa11.53□□□□□ -0.56
CSNK1D-226ENST00000585026 MAP1BP46821 2468 aaKnown RBP11.52□□□□□ -0.56
CSNK1D-226ENST00000585026 TRAV19A0A0A6YYK7 116 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 TULP1O00294 542 aaPredicted RBP11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 LDHAP00338 332 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 CKMP06732 381 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 ARSAP15289 507 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 HMGA1P17096 107 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 NMT1P30419 496 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 GBP1P32455 592 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 GJA4P35212 333 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 LONP1P36776 959 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 ZNF445P59923 1031 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 CREB5Q02930 508 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 PSMD2Q13200 908 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 DMC1Q14565 340 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 MTF1Q14872 753 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 CCDC183Q5T5S1 534 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 RESP18Q5W5W9 173 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 CAVIN1Q6NZI2 390 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 SLC39A4Q6P5W5 647 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 TMEM150AQ86TG1 271 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 ELOA2Q8IYF1 753 aaPredicted RBP11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 FMR1NBQ8N0W7 255 aaPredicted RBP11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 TMEM86AQ8N2M4 240 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 RPLP0P6Q8NHW5 317 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 SPATA18Q8TC71 538 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 OSCP1Q8WVF1 389 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 LARP4BQ92615 738 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 RAD54LQ92698 747 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 TRMT2BQ96GJ1 504 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 HHIPQ96QV1 700 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 ECT2Q9H8V3 914 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 CCL26Q9Y258 94 aa11.52□□□□□ -0.57
CSNK1D-226ENST00000585026 CHD8Q9HCK8 2581 aa11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 BCLAF3A2AJT9 711 aaKnown RBP11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 OTOL1A6NHN0 477 aaPredicted RBP11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 ANKRD63C9JTQ0 380 aa11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 KHNYNO15037 678 aaKnown RBP11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 NOL4O94818 638 aa11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 PLCG1P19174 1290 aa11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 PCSK1P29120 753 aa11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 LHX1P48742 406 aa11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 NOVA1P51513 510 aaKnown RBP11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 DGKEP52429 567 aa11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 GRIN1Q05586 938 aa11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 MCM6Q14566 821 aa11.51□□□□□ -0.57
CSNK1D-226ENST00000585026 KCNB1Q14721 858 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms