RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 CCL26Q9Y258 94 aa21.91■■□□□ 1.1
TOP3A-219ENST00000584887 POLR2DO15514 142 aaKnown RBP21.9■■□□□ 1.1
TOP3A-219ENST00000584887 ZSCAN22P10073 491 aaPredicted RBP21.9■■□□□ 1.1
TOP3A-219ENST00000584887 TDGF1P13385 188 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 CASP1P29466 404 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 ME1P48163 572 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 FOXK2Q01167 660 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 DGKKQ5KSL6 1271 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 SPEM1Q8N4L4 309 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 USP13Q92995 863 aaPredicted RBP21.9■■□□□ 1.1
TOP3A-219ENST00000584887 MMS19Q96T76 1030 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 PKMYT1Q99640 499 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 SYT15Q9BQS2 421 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 KIAA1586Q9HCI6 787 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 UXTQ9UBK9 157 aaPredicted RBP21.9■■□□□ 1.1
TOP3A-219ENST00000584887 RAB23Q9ULC3 237 aa21.9■■□□□ 1.1
TOP3A-219ENST00000584887 CLIC2O15247 247 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 ATP2C2O75185 946 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 F13A1P00488 732 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 SNRNP35Q16560 246 aaKnown RBP21.89■■□□□ 1.09
TOP3A-219ENST00000584887 WDR44Q5JSH3 913 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 HEATR6Q6AI08 1181 aaKnown RBP21.89■■□□□ 1.09
TOP3A-219ENST00000584887 TRIM68Q6AZZ1 485 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 CC2D1AQ6P1N0 951 aaPredicted RBP21.89■■□□□ 1.09
TOP3A-219ENST00000584887 MAMSTRQ6ZN01 415 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 PRR23BQ6ZRT6 265 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 EPM2AIP1Q7L775 607 aaPredicted RBP21.89■■□□□ 1.09
TOP3A-219ENST00000584887 MON1AQ86VX9 555 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 WDR49Q8IV35 697 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 SPRYD3Q8NCJ5 442 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 SPATA18Q8TC71 538 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 CCDC127Q96BQ5 260 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 FNBP1Q96RU3 617 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 C7orf25Q9BPX7 421 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 EBF3Q9H4W6 596 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 AGPAT3Q9NRZ7 376 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 TDP1Q9NUW8 608 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 FAM13BQ9NYF5 915 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 GMEB2Q9UKD1 530 aa21.89■■□□□ 1.09
TOP3A-219ENST00000584887 KIF26AQ9ULI4 1882 aaPredicted RBP21.88■■□□□ 1.09
TOP3A-219ENST00000584887 CHURC1-FNTBB4DL54 471 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 GABRDO14764 452 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 NOL4O94818 638 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 PDGFRBP09619 1106 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 TNNI1P19237 187 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 AFMP43652 599 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 FNTBP49356 437 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 C4orf50Q6ZRC1 276 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 UNC13DQ70J99 1090 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 HS2ST1Q7LGA3 356 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 ERMP1Q7Z2K6 904 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 ZNF507Q8TCN5 953 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 KBTBD7Q8WVZ9 684 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 MYLPFQ96A32 169 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 KIF9Q9HAQ2 790 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 MAGEF1Q9HAY2 307 aa21.88■■□□□ 1.09
TOP3A-219ENST00000584887 UBE4BO95155 1302 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 DENND4CQ5VZ89 1909 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 TGFB1I1O43294 461 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 TADA3O75528 432 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 CLSTN1O94985 981 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 ARSAP15289 507 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 LMO2P25791 158 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 DMWDQ09019 674 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 RUNX3Q13761 415 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 CFAP221Q4G0U5 840 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 CNNM4Q6P4Q7 775 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 TRAPPC11Q7Z392 1133 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 SCFD1Q8WVM8 642 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 FUBP3Q96I24 572 aaKnown RBP eCLIP21.87■■□□□ 1.09
TOP3A-219ENST00000584887 CGRRF1Q99675 332 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 SLC39A2Q9NP94 309 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 HPS4Q9NQG7 708 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 MAGEC2Q9UBF1 373 aaPredicted RBP21.87■■□□□ 1.09
TOP3A-219ENST00000584887 CDH9Q9ULB4 789 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 USP18Q9UMW8 372 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 PCDHA7Q9UN72 937 aa21.87■■□□□ 1.09
TOP3A-219ENST00000584887 OBSL1O75147 1896 aa21.86■■□□□ 1.09
TOP3A-219ENST00000584887 CKMP06732 381 aa21.86■■□□□ 1.09
TOP3A-219ENST00000584887 CYP27A1Q02318 531 aa21.86■■□□□ 1.09
TOP3A-219ENST00000584887 CYP24A1Q07973 514 aa21.86■■□□□ 1.09
TOP3A-219ENST00000584887 DPH6Q7L8W6 267 aa21.86■■□□□ 1.09
TOP3A-219ENST00000584887 DGLUCYQ7Z3D6 616 aa21.86■■□□□ 1.09
TOP3A-219ENST00000584887 GRAMD1CQ8IYS0 662 aa21.86■■□□□ 1.09
TOP3A-219ENST00000584887 XXYLT1Q8NBI6 393 aa21.86■■□□□ 1.09
TOP3A-219ENST00000584887 TRMT2BQ96GJ1 504 aaKnown RBP21.86■■□□□ 1.09
TOP3A-219ENST00000584887 FAM83CQ9BQN1 747 aa21.86■■□□□ 1.09
TOP3A-219ENST00000584887 SNX25Q9H3E2 840 aa21.86■■□□□ 1.09
TOP3A-219ENST00000584887 TRAV19A0A0A6YYK7 116 aa21.85■■□□□ 1.09
TOP3A-219ENST00000584887 WARSP23381 471 aaKnown RBP21.85■■□□□ 1.09
TOP3A-219ENST00000584887 BDNFP23560 247 aa21.85■■□□□ 1.09
TOP3A-219ENST00000584887 GRIK1P39086 918 aa21.85■■□□□ 1.09
TOP3A-219ENST00000584887 MAGEA11P43364 429 aa21.85■■□□□ 1.09
TOP3A-219ENST00000584887 CCINQ13939 588 aa21.85■■□□□ 1.09
TOP3A-219ENST00000584887 PSMD6Q15008 389 aa21.85■■□□□ 1.09
TOP3A-219ENST00000584887 FAM171BQ6P995 826 aa21.85■■□□□ 1.09
TOP3A-219ENST00000584887 CEP57L1Q8IYX8 460 aa21.85■■□□□ 1.09
TOP3A-219ENST00000584887 RIN3Q8TB24 985 aa21.85■■□□□ 1.09
TOP3A-219ENST00000584887 MRPL45Q9BRJ2 306 aaKnown RBP21.85■■□□□ 1.09
TOP3A-219ENST00000584887 CRTAC1Q9NQ79 661 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms