RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CPXM1Q96SM3 734 aa11.87□□□□□ -0.51
TOP3A-217ENST00000584582 HCRTO43612 131 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 ZC3H11AO75152 810 aaKnown RBP eCLIP11.86□□□□□ -0.51
TOP3A-217ENST00000584582 SUN1O94901 812 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 MT-ND3P03897 115 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 IL9RQ01113 521 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 TAF1CQ15572 869 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-217ENST00000584582 NFIL3Q16649 462 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 DPY19L2P1Q6NXN4 242 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 KLHL29Q96CT2 875 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 GCOM2Q9BZD3 368 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-217ENST00000584582 SIK2Q9H0K1 926 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 DDX20Q9UHI6 824 aaKnown RBP11.86□□□□□ -0.51
TOP3A-217ENST00000584582 XPO7Q9UIA9 1087 aaKnown RBP11.86□□□□□ -0.51
TOP3A-217ENST00000584582 NFASCO94856 1347 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 MIPP30301 263 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 LAMC2Q13753 1193 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 PIGHQ14442 188 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-217ENST00000584582 TFDP3Q5H9I0 405 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 ZPBP2Q6X784 338 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 C18orf25Q96B23 403 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-217ENST00000584582 TRABDQ9H4I3 376 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 NAALADL1Q9UQQ1 740 aa11.86□□□□□ -0.51
TOP3A-217ENST00000584582 CES2O00748 559 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 MICAL2O94851 1124 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 TTC4O95801 387 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 CA8P35219 290 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 PHBP35232 272 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 ARL4CP56559 192 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 CORO7P57737 925 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 TNFAIP2Q03169 654 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 GRIK4Q16099 956 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 DCAF6Q58WW2 860 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 ARHGEF18Q6ZSZ5 1173 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 TMEM176AQ96HP8 235 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 ZBED3Q96IU2 234 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-217ENST00000584582 TWNKQ96RR1 684 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 ST6GALNAC4Q9H4F1 302 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 NINJ2Q9NZG7 142 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 TPX2Q9ULW0 747 aaKnown RBP11.85□□□□□ -0.51
TOP3A-217ENST00000584582 HUS1O60921 280 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 SESN3P58005 492 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 ROR1Q01973 937 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 DSTYKQ6XUX3 929 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 CROCCP2Q86T23 111 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 SIX6OS1Q8N1H7 587 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 C1orf127Q8N9H9 656 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 FBF1Q8TES7 1133 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 GRHL1Q9NZI5 618 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 MARCOQ9UEW3 520 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-217ENST00000584582 TMEM59LQ9UK28 342 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 USP18Q9UMW8 372 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 UBR3Q6ZT12 1888 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 MSCO60682 206 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 CPP00450 1065 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 AGTP01019 485 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 CCDC130P13994 396 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 ZNF200P98182 395 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-217ENST00000584582 CENPCQ03188 943 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 AP1B1Q10567 949 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 ZDHHC24Q6UX98 284 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 EXOC8Q8IYI6 725 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 DNAAF3Q8N9W5 541 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 BEST2Q8NFU1 509 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 RILPQ96NA2 401 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 SH3GL2Q99962 352 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 STRA6Q9BX79 667 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 G3BP2Q9UN86 482 aaKnown RBP11.85□□□□□ -0.51
TOP3A-217ENST00000584582 COQ4Q9Y3A0 265 aa11.85□□□□□ -0.51
TOP3A-217ENST00000584582 CDH16O75309 829 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 UNGP13051 313 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 CCDC6Q16204 474 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 AGBL2Q5U5Z8 902 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 KCNV1Q6PIU1 500 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 RFX8Q6ZV50 586 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 EXD1Q8NHP7 514 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 CCDC110Q8TBZ0 833 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 FAM172AQ8WUF8 416 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 CXCL11O14625 94 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 AVILO75366 819 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 PTGIRP43119 386 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 ZNF157P51786 506 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 C1QBPQ07021 282 aaKnown RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 AUHQ13825 339 aaKnown RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 RCN2Q14257 317 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 GNASQ5JWF2 1037 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 TRMT10CQ7L0Y3 403 aaKnown RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 MON1BQ7L1V2 547 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 AGR3Q8TD06 166 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 DDX1Q92499 740 aaKnown RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 FERMT1Q9BQL6 677 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 SYT17Q9BSW7 474 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 SMYD2Q9NRG4 433 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 CDK5RAP2Q96SN8 1893 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 PPFIA2O75334 1257 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 KRT4P19013 534 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 MMP8P22894 467 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 ALDH3A1P30838 453 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 ARL4AP40617 200 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms