RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	SLC5A9	Q2M3M2	681 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	DENND1B	Q6P3S1	775 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	FZD8	Q9H461	694 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ELP3	Q9H9T3	547 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SAYSD1	Q9NPB0	183 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SLC5A4	Q9NY91	659 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	POLI	Q9UNA4	740 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377		A0A0G2JLL6	359 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	TCP11X1	B4DZS4	312 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CNMD	O75829	334 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	LINGO3	P0C6S8	592 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ETS1	P14921	441 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	POLR2B	P30876	1174 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	PTPN7	P35236	360 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CDKN2B	P42772	138 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	VCP	P55072	806 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	PLCB3	Q01970	1234 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	BLMH	Q13867	455 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	PTPN20	Q4JDL3	420 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	EEF1DP3	Q658K8	133 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	FBXO16	Q8IX29	292 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SRRM1	Q8IYB3	904 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	FGD4	Q96M96	766 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SLC12A4	Q9UP95	1085 aa		13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	DRG1	Q9Y295	367 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1D-222	ENST00000584377	LIN7A	O14910	233 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	AHCYL1	O43865	530 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SLC25A27	O95847	323 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CXCL8	P10145	99 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	PSMA2	P25787	234 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	RFC1	P35251	1148 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	RAP1GAP	P47736	663 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SLC30A9	Q6PML9	568 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ADM5	C9JUS6	153 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	GSTA1	P08263	222 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ABHD2	P08910	425 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	KRT3	P12035	628 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CLCN3	P51790	818 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	MPP2	Q14168	576 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ZNF268	Q14587	947 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	OASL	Q15646	514 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	PDCD2	Q16342	344 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	WDR72	Q3MJ13	1102 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	EFCAB12	Q6NXP0	572 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	NLGN2	Q8NFZ4	835 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	NKD2	Q969F2	451 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CFAP57	Q96MR6	1250 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	TMEM121	Q9BTD3	319 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	RPF1	Q9H9Y2	349 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	TXNRD2	Q9NNW7	524 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	FGFR1OP2	Q9NVK5	253 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	AGTPBP1	Q9UPW5	1226 aa		13.9	□□□□□ -0.18
CSNK1D-222	ENST00000584377	MED7	O43513	233 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SNX3	O60493	162 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	GH1	P01241	217 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	IFNB1	P01574	187 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	KCTD2	Q14681	263 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ZNF667	Q5HYK9	610 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	POLN	Q7Z5Q5	900 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SULF1	Q8IWU6	871 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TMEM192	Q8IY95	271 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	GDAP1	Q8TB36	358 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	COPS5	Q92905	334 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CDT1	Q9H211	546 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MINDY3	Q9H8M7	445 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TJP2	Q9UDY2	1190 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	EXOC1L	A0A1B0GW35	172 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377		A6NHS1	94 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SGK1	O00141	431 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ITGAV	P06756	1048 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	NEFH	P12036	1026 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	IREB2	P48200	963 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SLC26A2	P50443	739 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MBTD1	Q05BQ5	628 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ADCY1	Q08828	1119 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MORF4L2	Q15014	288 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SMTNL2	Q2TAL5	461 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	DCPS	Q96C86	337 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TTC25	Q96NG3	672 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	LHX5	Q9H2C1	402 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SMARCAD1	Q9H4L7	1026 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SYNC	Q9H7C4	482 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ZWILCH	Q9H900	591 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CYTH4	Q9UIA0	394 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CFAP73	A6NFT4	308 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SIGLEC16	A6NMB1	481 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	IL18RAP	O95256	599 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CDH8	P55286	799 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PSMC1	P62191	440 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	DYNLT1	P63172	113 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TMED2	Q15363	201 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	WDR78	Q5VTH9	848 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	NUGGC	Q68CJ6	796 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ARHGEF18	Q6ZSZ5	1173 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	RIBC1	Q8N443	379 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	JOSD2	Q8TAC2	188 aa		13.89	□□□□□ -0.19

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