RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 PAX3P23760 479 aa22.04■■□□□ 1.12
SRSF1-206ENST00000583741 TMEM196Q5HYL7 178 aa22.04■■□□□ 1.12
SRSF1-206ENST00000583741 STKLD1Q8NE28 680 aa22.04■■□□□ 1.12
SRSF1-206ENST00000583741 RIN3Q8TB24 985 aa22.04■■□□□ 1.12
SRSF1-206ENST00000583741 EBF3Q9H4W6 596 aa22.04■■□□□ 1.12
SRSF1-206ENST00000583741 POLR3BQ9NW08 1133 aaPredicted RBP22.04■■□□□ 1.12
SRSF1-206ENST00000583741 THG1LQ9NWX6 298 aaKnown RBP22.04■■□□□ 1.12
SRSF1-206ENST00000583741 ABI2Q9NYB9 513 aaPredicted RBP22.04■■□□□ 1.12
SRSF1-206ENST00000583741 HOOK1Q9UJC3 728 aaKnown RBP22.04■■□□□ 1.12
SRSF1-206ENST00000583741 DSEQ9UL01 958 aa22.04■■□□□ 1.12
SRSF1-206ENST00000583741 RPP40O75818 363 aaKnown RBP22.03■■□□□ 1.12
SRSF1-206ENST00000583741 HAPLN1P10915 354 aaPredicted RBP22.03■■□□□ 1.12
SRSF1-206ENST00000583741 HMGA1P17096 107 aaKnown RBP22.03■■□□□ 1.12
SRSF1-206ENST00000583741 GTF2BQ00403 316 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 MCM6Q14566 821 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 AASDHQ4L235 1098 aaPredicted RBP22.03■■□□□ 1.12
SRSF1-206ENST00000583741 WSCD1Q658N2 575 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 KBTBD6Q86V97 674 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 SPPL2BQ8TCT7 592 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 USP13Q92995 863 aaPredicted RBP22.03■■□□□ 1.12
SRSF1-206ENST00000583741 IKZF4Q9H2S9 585 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 CUEDC2Q9H467 287 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 STK17AQ9UEE5 414 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 C2CD2Q9Y426 696 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 MYO16Q9Y6X6 1858 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 SYCE3A1L190 88 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 RAP1GAPP47736 663 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 TAF6P49848 677 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 NLRP12P59046 1061 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 RUNX3Q13761 415 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 TAF12Q16514 161 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 ZC2HC1CQ53FD0 456 aaPredicted RBP22.03■■□□□ 1.12
SRSF1-206ENST00000583741 METTL23Q86XA0 190 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 EFCAB13Q8IY85 973 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 ELOA2Q8IYF1 753 aaPredicted RBP22.03■■□□□ 1.12
SRSF1-206ENST00000583741 MAB21L3Q8N8X9 362 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 C2orf15Q8WU43 125 aaKnown RBP22.03■■□□□ 1.12
SRSF1-206ENST00000583741 ZHX3Q9H4I2 956 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 ASB7Q9H672 318 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 DPP3Q9NY33 737 aa22.03■■□□□ 1.12
SRSF1-206ENST00000583741 KIAA1549LQ6ZVL6 1849 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 ASPMQ8IZT6 3477 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 EPN2O95208 641 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 F11P03951 625 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 AVPR1AP37288 418 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 GPR15P49685 360 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 LIMK1P53667 647 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 NAIF1Q69YI7 327 aaPredicted RBP22.02■■□□□ 1.12
SRSF1-206ENST00000583741 IL31Q6EBC2 164 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 RBM43Q6ZSC3 357 aaKnown RBP22.02■■□□□ 1.12
SRSF1-206ENST00000583741 CACNA2D4Q7Z3S7 1137 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 THEM5Q8N1Q8 247 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 LOXL4Q96JB6 756 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 MAGEF1Q9HAY2 307 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 FBRSL1Q9HCM7 1045 aaKnown RBP22.02■■□□□ 1.12
SRSF1-206ENST00000583741 TMLHEQ9NVH6 421 aa22.02■■□□□ 1.12
SRSF1-206ENST00000583741 CCDC163A0A0D9SF12 145 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 TRDMT1O14717 391 aaKnown RBP22.01■■□□□ 1.11
SRSF1-206ENST00000583741 TM4SF5O14894 197 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 EGFP01133 1207 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 KRT18P05783 430 aaKnown RBP22.01■■□□□ 1.11
SRSF1-206ENST00000583741 ZNF806P0C7X5 589 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 ARSAP15289 507 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 GRSF1Q12849 480 aaKnown RBP eCLIP22.01■■□□□ 1.11
SRSF1-206ENST00000583741 TXNDC8Q6A555 127 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 C12orf50Q8NA57 414 aaPredicted RBP22.01■■□□□ 1.11
SRSF1-206ENST00000583741 DDX1Q92499 740 aaKnown RBP22.01■■□□□ 1.11
SRSF1-206ENST00000583741 RAD54LQ92698 747 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 PAGE5Q96GU1 130 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 SMOC1Q9H4F8 434 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 ZMYM5Q9UJ78 669 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 AGO2Q9UKV8 859 aaKnown RBP22.01■■□□□ 1.11
SRSF1-206ENST00000583741 STYXL1Q9Y6J8 313 aa22.01■■□□□ 1.11
SRSF1-206ENST00000583741 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22■■□□□ 1.11
SRSF1-206ENST00000583741 RNF40O75150 1001 aa22■■□□□ 1.11
SRSF1-206ENST00000583741 TBCAO75347 108 aaKnown RBP22■■□□□ 1.11
SRSF1-206ENST00000583741 CCDC192P0DO97 292 aa22■■□□□ 1.11
SRSF1-206ENST00000583741 AFMP43652 599 aa22■■□□□ 1.11
SRSF1-206ENST00000583741 SMARCB1Q12824 385 aa22■■□□□ 1.11
SRSF1-206ENST00000583741 BFSP1Q12934 665 aa22■■□□□ 1.11
SRSF1-206ENST00000583741 POSTNQ15063 836 aa22■■□□□ 1.11
SRSF1-206ENST00000583741 CRELD2Q6UXH1 353 aaPredicted RBP22■■□□□ 1.11
SRSF1-206ENST00000583741 LARP4BQ92615 738 aaKnown RBP22■■□□□ 1.11
SRSF1-206ENST00000583741 TDP1Q9NUW8 608 aa22■■□□□ 1.11
SRSF1-206ENST00000583741 SLC8A2Q9UPR5 921 aa22■■□□□ 1.11
SRSF1-206ENST00000583741 KPNA7A9QM74 516 aa21.99■■□□□ 1.11
SRSF1-206ENST00000583741 PNOCQ13519 176 aa21.99■■□□□ 1.11
SRSF1-206ENST00000583741 PLA2G2CQ5R387 149 aa21.99■■□□□ 1.11
SRSF1-206ENST00000583741 N4BP2L1Q5TBK1 243 aaPredicted RBP21.99■■□□□ 1.11
SRSF1-206ENST00000583741 SDHAF4Q5VUM1 108 aa21.99■■□□□ 1.11
SRSF1-206ENST00000583741 GRAMD1CQ8IYS0 662 aa21.99■■□□□ 1.11
SRSF1-206ENST00000583741 PI4K2AQ9BTU6 479 aa21.99■■□□□ 1.11
SRSF1-206ENST00000583741 PCDHB5Q9Y5E4 795 aa21.99■■□□□ 1.11
SRSF1-206ENST00000583741 ATG13O75143 517 aa21.98■■□□□ 1.11
SRSF1-206ENST00000583741 TADA3O75528 432 aa21.98■■□□□ 1.11
SRSF1-206ENST00000583741 PMLP29590 882 aa21.98■■□□□ 1.11
SRSF1-206ENST00000583741 DCP1BQ8IZD4 617 aaKnown RBP21.98■■□□□ 1.11
SRSF1-206ENST00000583741 ERCC4Q92889 916 aaPredicted RBP21.98■■□□□ 1.11
SRSF1-206ENST00000583741 HHIPQ96QV1 700 aa21.98■■□□□ 1.11
SRSF1-206ENST00000583741 KIF9Q9HAQ2 790 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms