RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PBKQ96KB5 322 aa10.56□□□□□ -0.72
MKS1-212ENST00000583577 DRC1Q96MC2 740 aa10.56□□□□□ -0.72
MKS1-212ENST00000583577 RPP25Q9BUL9 199 aaKnown RBP10.56□□□□□ -0.72
MKS1-212ENST00000583577 FAM126AQ9BYI3 521 aaPredicted RBP10.56□□□□□ -0.72
MKS1-212ENST00000583577 MMRN2Q9H8L6 949 aa10.56□□□□□ -0.72
MKS1-212ENST00000583577 METTL14Q9HCE5 456 aaKnown RBP10.56□□□□□ -0.72
MKS1-212ENST00000583577 LTB4R2Q9NPC1 389 aa10.56□□□□□ -0.72
MKS1-212ENST00000583577 GPRC5CQ9NQ84 441 aa10.56□□□□□ -0.72
MKS1-212ENST00000583577 PRMT8Q9NR22 394 aaPredicted RBP10.56□□□□□ -0.72
MKS1-212ENST00000583577 GOLGA6AQ9NYA3 693 aa10.56□□□□□ -0.72
MKS1-212ENST00000583577 GGA2Q9UJY4 613 aa10.56□□□□□ -0.72
MKS1-212ENST00000583577 IRAK3Q9Y616 596 aa10.56□□□□□ -0.72
MKS1-212ENST00000583577 CITO14578 2027 aa10.56□□□□□ -0.72
MKS1-212ENST00000583577 SPTA1P02549 2419 aa10.56□□□□□ -0.72
MKS1-212ENST00000583577 USP9XQ93008 2570 aaPredicted RBP10.56□□□□□ -0.72
MKS1-212ENST00000583577 TDRD15B5MCY1 1934 aaKnown RBP10.55□□□□□ -0.72
MKS1-212ENST00000583577 CACNA1EQ15878 2313 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 A0A0A6YYK5 440 aaPredicted RBP10.55□□□□□ -0.72
MKS1-212ENST00000583577 FRMD3A2A2Y4 597 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 GTPBP10A4D1E9 387 aaKnown RBP10.55□□□□□ -0.72
MKS1-212ENST00000583577 TMEM8BA6NDV4 472 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 LRRIQ4A6NIV6 560 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 ENC1O14682 589 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 TM4SF5O14894 197 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 HIP1RO75146 1068 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 ZC3H11AO75152 810 aaKnown RBP eCLIP10.55□□□□□ -0.72
MKS1-212ENST00000583577 CPP00450 1065 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 ABL1P00519 1130 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 KRT18P05783 430 aaKnown RBP10.55□□□□□ -0.72
MKS1-212ENST00000583577 LAMP2P13473 410 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 GLRA2P23416 452 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 GUCY2CP25092 1073 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 EIF4A3P38919 411 aaKnown RBP10.55□□□□□ -0.72
MKS1-212ENST00000583577 CORO7P57737 925 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 PRKCQQ04759 706 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 CAPSQ13938 189 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 NAB2Q15742 525 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 SLC18A3Q16572 532 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 NFIL3Q16649 462 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 SOWAHCQ53LP3 525 aaPredicted RBP10.55□□□□□ -0.72
MKS1-212ENST00000583577 CLLU1OSQ5K130 101 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 FAM26FQ5R3K3 315 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 PSAPL1Q6NUJ1 521 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 MICALCLQ6ZW33 695 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 C1orf186Q6ZWK4 172 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 CATSPER4Q7RTX7 472 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 VPS36Q86VN1 386 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 FAM228AQ86W67 206 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 GPBP1Q86WP2 473 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 ZBTB8OSQ8IWT0 167 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 HELQQ8TDG4 1101 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 ASAP3Q8TDY4 903 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 SMG7Q92540 1137 aaKnown RBP10.55□□□□□ -0.72
MKS1-212ENST00000583577 DDX12PQ92771 950 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 KLHL5Q96PQ7 755 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 DDX23Q9BUQ8 820 aaKnown RBP10.55□□□□□ -0.72
MKS1-212ENST00000583577 RUSC1Q9BVN2 902 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 EMILIN2Q9BXX0 1053 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 ADAM33Q9BZ11 813 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 OSBPL6Q9BZF3 934 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 IFT122Q9HBG6 1241 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 MAN1C1Q9NR34 630 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 KCNG1Q9UIX4 513 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 CELSR3Q9NYQ7 3312 aa10.55□□□□□ -0.72
MKS1-212ENST00000583577 TICRRQ7Z2Z1 1910 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 PCNX2A6NKB5 2137 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 A0A087WUV0 522 aaPredicted RBP10.54□□□□□ -0.72
MKS1-212ENST00000583577 MACROD2A1Z1Q3 448 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 LRRC53A6NM62 1247 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 ANHXE9PGG2 379 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 CCDC188H7C350 402 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 INO80B-WBP1J3KQ70 363 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 EBAG9O00559 213 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 CETN3O15182 167 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 INPPL1O15357 1258 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 SLC16A3O15427 465 aaKnown RBP10.54□□□□□ -0.72
MKS1-212ENST00000583577 FOXD2O60548 495 aaPredicted RBP10.54□□□□□ -0.72
MKS1-212ENST00000583577 CSDE1O75534 798 aaKnown RBP10.54□□□□□ -0.72
MKS1-212ENST00000583577 ERLIN2O94905 339 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 CNPP09543 421 aaKnown RBP10.54□□□□□ -0.72
MKS1-212ENST00000583577 FGFR4P22455 802 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 RPL13P26373 211 aaKnown RBP10.54□□□□□ -0.72
MKS1-212ENST00000583577 TARSP26639 723 aaKnown RBP10.54□□□□□ -0.72
MKS1-212ENST00000583577 USP8P40818 1118 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 NAMPTP43490 491 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 LIMK1P53667 647 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 NRLP54845 237 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 PTENP60484 403 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 MTAPQ13126 283 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 CUL1Q13616 776 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 PCBP1Q15365 356 aaKnown RBP eCLIP10.54□□□□□ -0.72
MKS1-212ENST00000583577 SF3A2Q15428 464 aaKnown RBP10.54□□□□□ -0.72
MKS1-212ENST00000583577 CCDC40Q4G0X9 1142 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 LRIG3Q6UXM1 1119 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 LRRC31Q6UY01 552 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 RRAGAQ7L523 313 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 DDX53Q86TM3 631 aaKnown RBP10.54□□□□□ -0.72
MKS1-212ENST00000583577 TRIM59Q8IWR1 403 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 SYCE1Q8N0S2 351 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 DEPTORQ8TB45 409 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms