RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 KITP10721 976 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 FDXRP22570 491 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 CASP5P51878 434 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 RAP2BP61225 183 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 RESTQ13127 1097 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 EFCAB12Q6NXP0 572 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 GPRIN1Q7Z2K8 1008 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 EXOC8Q8IYI6 725 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 ENAHQ8N8S7 591 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 C1orf43Q9BWL3 253 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 APOL5Q9BWW9 433 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 TRIM54Q9BYV2 358 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 DPH1Q9BZG8 443 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 REXO4Q9GZR2 422 aaKnown RBP4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 STARD7Q9NQZ5 370 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 ASB6Q9NWX5 421 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 ARPP21Q9UBL0 812 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 AFF4Q9UHB7 1163 aaKnown RBP4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 ZNF112Q9UJU3 913 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 PCDHA6Q9UN73 950 aa4.56□□□□□ -1.68
SMCHD1-209ENST00000583441 TCRBV7S2A1N4TA0A589 114 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 TBX3O15119 743 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 GJB1P08034 283 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 SETSIPP0DME0 302 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 PIK3CBP42338 1070 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 ARFIP2P53365 341 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 POU6F2P78424 691 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 NHLH2Q02577 135 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 RAB32Q13637 225 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 RAPGEF1Q13905 1077 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 UBXN2BQ14CS0 331 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 MTX3Q5HYI7 312 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 Q6ZNX1 250 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 OR2C3Q8N628 320 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 FITM2Q8N6M3 262 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 DEPTORQ8TB45 409 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 SLC35B2Q8TB61 432 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 ADAMTS15Q8TE58 950 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 PARD3BQ8TEW8 1205 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 SCAMP4Q969E2 229 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 NMD3Q96D46 503 aaKnown RBP4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 Q96MF0 132 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 TBCBQ99426 244 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 COLEC11Q9BWP8 271 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 LSM14BQ9BX40 385 aaKnown RBP4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 CHMP4AQ9BY43 222 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 GPR35Q9HC97 309 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 PLCB1Q9NQ66 1216 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 SERHLQ9NQF3 203 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 TAGLN3Q9UI15 199 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 CORO2BQ9UQ03 480 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 DMTF1Q9Y222 760 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 MAP3K2Q9Y2U5 619 aa4.55□□□□□ -1.68
SMCHD1-209ENST00000583441 WIPF3A6NGB9 483 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 IFRD1O00458 451 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 WNT10BO00744 389 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 TBC1D4O60343 1298 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 IL18RAPO95256 599 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 AHSGP02765 367 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 PRIM2P49643 509 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 NOMO3P69849 1222 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 FMO1Q01740 532 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 EXOSC9Q06265 439 aaKnown RBP4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 DAG1Q14118 895 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 KRT72Q14CN4 511 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 DGKKQ5KSL6 1271 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 LMBRD2Q68DH5 695 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 UBE3BQ7Z3V4 1068 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 OR10H5Q8NGA6 315 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 SGCZQ96LD1 299 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 MYOCQ99972 504 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 ZNF518BQ9C0D4 1074 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 SPON1Q9HCB6 807 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 ARFGAP3Q9NP61 516 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 SLAMF7Q9NQ25 335 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 FOXJ2Q9P0K8 574 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 RGS17Q9UGC6 210 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 PLEKHM1Q9Y4G2 1056 aa4.54□□□□□ -1.68
SMCHD1-209ENST00000583441 USP19O94966 1318 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 TRIM43BA6NCK2 446 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 FOSP01100 380 aaPredicted RBP4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 SBK3P0C264 359 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 SNHG28P0DPA3 235 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 STT3AP46977 705 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 SUMO3P55854 103 aaPredicted RBP4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 MRPS35P82673 323 aaKnown RBP4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 ZNF543Q08ER8 600 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 EIF2B5Q13144 721 aaKnown RBP4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 SLC13A2Q13183 592 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 PDCD4Q53EL6 469 aaKnown RBP4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 IZUMO3Q5VZ72 239 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 ANKS6Q68DC2 871 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 ARMC6Q6NXE6 501 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 DLK2Q6UY11 383 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 TECPR1Q7Z6L1 1165 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 COL23A1Q86Y22 540 aaPredicted RBP4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 XYLT1Q86Y38 959 aa4.53□□□□□ -1.68
SMCHD1-209ENST00000583441 NUP133Q8WUM0 1156 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms