RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ARL13BQ3SXY8 428 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 MGAT5BQ3V5L5 792 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 MICALCLQ6ZW33 695 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 GAS2L3Q86XJ1 694 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 YAF2Q8IY57 180 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 COLGALT2Q8IYK4 626 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 TXLNBQ8N3L3 684 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 SLC16A11Q8NCK7 471 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 LRRC46Q96FV0 321 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 AS3MTQ9HBK9 375 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 PLCB1Q9NQ66 1216 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 TMEM74BQ9NUR3 256 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 CDC23Q9UJX2 597 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 PADI4Q9UM07 663 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 FZD1Q9UP38 647 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 A0A1W2PPC4 97 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 TMEM200CA6NKL6 621 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 SOAT2O75908 522 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 FGF18O76093 207 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 CD6P30203 668 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 SATB1Q01826 763 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 TUBA3CQ13748 450 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 SLC29A2Q14542 456 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 HLXQ14774 488 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 RBM20Q5T481 1227 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 ARHGAP40Q5TG30 622 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 VPS53Q5VIR6 699 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 TUBA3EQ6PEY2 450 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 KCTD20Q7Z5Y7 419 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 SDR16C5Q8N3Y7 309 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 SLC30A5Q8TAD4 765 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 IPCEF1Q8WWN9 437 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 HAS1Q92839 578 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 ZNF503Q96F45 646 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 PPP1R9BQ96SB3 815 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 ARPC5LQ9BPX5 153 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 COLEC11Q9BWP8 271 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 ARFGAP3Q9NP61 516 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 INTS13Q9NVM9 706 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 MYO1AQ9UBC5 1043 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 DKK2Q9UBU2 259 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 CEP83Q9Y592 693 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 ARID4BQ4LE39 1312 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 SPATA31A3Q5VYP0 1347 aa6.74□□□□□ -1.33
SMARCE1-219ENST00000583294 LOC102723971A0A1B0GUV8 181 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 ABHD14A-ACY1A0A1B0GW23 586 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 TPD52L2O43399 206 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 TRIAP1O43715 76 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 BTF3P20290 206 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 ACVR2AP27037 513 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 IL1R2P27930 398 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 MAPK10P53779 464 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 BTKQ06187 659 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 LSM12Q3MHD2 195 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 CACHD1Q5VU97 1274 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 SP5Q6BEB4 398 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 ARMC6Q6NXE6 501 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 GPR149Q86SP6 731 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 BPIFB1Q8TDL5 484 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 BRI3BPQ8WY22 251 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 PPP2R3CQ969Q6 453 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 PTCD3Q96EY7 689 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 PSMD1Q99460 953 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 PTDSS2Q9BVG9 487 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 ZNF341Q9BYN7 854 aa6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 TESQ9UGI8 421 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-219ENST00000583294 RASAL1O95294 804 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 PEX11BO96011 259 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 ITGAMP11215 1152 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 PPP3CBP16298 524 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 LRPAP1P30533 357 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 PTGS2P35354 604 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 PPM1AP35813 382 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 PTDSS1P48651 473 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 PRKAG1P54619 331 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 MYO1EQ12965 1108 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 CHAF1AQ13111 956 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 STK3Q13188 491 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 ARHGEF7Q14155 803 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 INSCQ1MX18 579 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 SLC35G1Q2M3R5 365 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 RGS7BPQ6MZT1 257 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 KCNV1Q6PIU1 500 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 TSHZ1Q6ZSZ6 1077 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 BEND5Q7L4P6 421 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 Q8N1X5 172 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 PROKR1Q8TCW9 393 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 ZNF566Q969W8 418 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 ZC3H10Q96K80 434 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 TPSD1Q9BZJ3 242 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 SCAND2PQ9GZW5 306 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 CXorf36Q9H7Y0 433 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 SERTAD3Q9UJW9 196 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 NDRG4Q9ULP0 352 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 MAN2B2Q9Y2E5 1009 aa6.72□□□□□ -1.33
SMARCE1-219ENST00000583294 F5H423 210 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-219ENST00000583294 MYL4P12829 197 aa6.71□□□□□ -1.34
SMARCE1-219ENST00000583294 C6P13671 934 aa6.71□□□□□ -1.34
SMARCE1-219ENST00000583294 TPH1P17752 444 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms