RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 ACP6Q9NPH0 428 aa13.15□□□□□ -0.3
CDH8-208ENST00000582980 NOCTQ9UK39 431 aaKnown RBP13.15□□□□□ -0.3
CDH8-208ENST00000582980 TSPAN16Q9UKR8 245 aa13.15□□□□□ -0.3
CDH8-208ENST00000582980 MAFFQ9ULX9 164 aa13.15□□□□□ -0.3
CDH8-208ENST00000582980 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
CDH8-208ENST00000582980 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDH8-208ENST00000582980 PCDHB5Q9Y5E4 795 aa13.15□□□□□ -0.3
CDH8-208ENST00000582980 LAMA3Q16787 3333 aa13.15□□□□□ -0.31
CDH8-208ENST00000582980 SSU72P8A0A1W2PR75 194 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 WDR27A2RRH5 827 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 EPOPA6NHQ4 379 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 TEX28O15482 410 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 CNPP09543 421 aaKnown RBP13.14□□□□□ -0.31
CDH8-208ENST00000582980 FAM200BP0CF97 657 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 SKILP12757 684 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 TNFAIP3P21580 790 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 KLRC2P26717 231 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 ADORA2BP29275 332 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 IRS1P35568 1242 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 BCAT1P54687 386 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 CAMK1Q14012 370 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 CFAP221Q4G0U5 840 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 ZNF697Q5TEC3 545 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 TAF3Q5VWG9 929 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 HGSNATQ68CP4 663 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 WDR59Q6PJI9 974 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 RSPO2Q6UXX9 243 aaPredicted RBP13.14□□□□□ -0.31
CDH8-208ENST00000582980 FAM35AQ86V20 835 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 LRRTM3Q86VH5 581 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 TMTC1Q8IUR5 882 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 GLYCTKQ8IVS8 523 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 FUKQ8N0W3 1084 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 ZNF461Q8TAF7 563 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 SLC20A1Q8WUM9 679 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 TFAP2BQ92481 460 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 DDX1Q92499 740 aaKnown RBP13.14□□□□□ -0.31
CDH8-208ENST00000582980 MRPL38Q96DV4 380 aaKnown RBP13.14□□□□□ -0.31
CDH8-208ENST00000582980 SMARCD1Q96GM5 515 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 CCDC42Q96M95 316 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 PGLYRP2Q96PD5 576 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 KLHL5Q96PQ7 755 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
CDH8-208ENST00000582980 B3GNT5Q9BYG0 378 aa13.14□□□□□ -0.31
CDH8-208ENST00000582980 SEPT11Q9NVA2 429 aaKnown RBP13.14□□□□□ -0.31
CDH8-208ENST00000582980 ABI2Q9NYB9 513 aaPredicted RBP13.14□□□□□ -0.31
CDH8-208ENST00000582980 AFF4Q9UHB7 1163 aaKnown RBP13.14□□□□□ -0.31
CDH8-208ENST00000582980 MTMR11A4FU01 709 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 HIDE1A8MVS5 230 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 M0QYV0 167 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 ADAM12O43184 909 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 MICAL2O94851 1124 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 LSM8O95777 96 aaKnown RBP13.13□□□□□ -0.31
CDH8-208ENST00000582980 C1RP00736 705 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 CALCAP01258 141 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 MMEP08473 750 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 SETSIPP0DME0 302 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 NPR3P17342 541 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 FECHP22830 423 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 ELF1P32519 619 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 BST2Q10589 180 aaKnown RBP13.13□□□□□ -0.31
CDH8-208ENST00000582980 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
CDH8-208ENST00000582980 PPP1R2P3Q6NXS1 205 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 VSTM1Q6UX27 236 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 RNF19BQ6ZMZ0 732 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 ZNF571Q7Z3V5 609 aaPredicted RBP13.13□□□□□ -0.31
CDH8-208ENST00000582980 LRRC8AQ8IWT6 810 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 ANKRD52Q8NB46 1076 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 LPIN3Q9BQK8 851 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDH8-208ENST00000582980 ZNF518BQ9C0D4 1074 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 LHX5Q9H2C1 402 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 KRT82Q9NSB4 513 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 TMLHEQ9NVH6 421 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 ARHGAP20Q9P2F6 1191 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 HSFX1Q9UBD0 423 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 PTPRDP23468 1912 aa13.13□□□□□ -0.31
CDH8-208ENST00000582980 TRIOBPQ9H2D6 2365 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 CLDN5O00501 218 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 AKR1B10O60218 316 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 AP1G2O75843 785 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 ABLIM3O94929 683 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 GLUD1P00367 558 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 ATF2P15336 505 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 BDNFP23560 247 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 CYLC1P35663 651 aaPredicted RBP13.12□□□□□ -0.31
CDH8-208ENST00000582980 MAGEA11P43364 429 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 TUFMP49411 452 aaKnown RBP13.12□□□□□ -0.31
CDH8-208ENST00000582980 FMO1Q01740 532 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 ADCY1Q08828 1119 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 CCDC142Q17RM4 750 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 ELMSAN1Q6PJG2 1045 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 PALB2Q86YC2 1186 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 PASD1Q8IV76 773 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 CCDC170Q8IYT3 715 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 TMEM35BQ8NCS4 154 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 MSANTD4Q8NCY6 345 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 NOX5Q96PH1 765 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 CHP1Q99653 195 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 ZSWIM1Q9BR11 485 aa13.12□□□□□ -0.31
CDH8-208ENST00000582980 SYT11Q9BT88 431 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms