RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	TOP1	P11387	765 aa	Known RBP	5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	EPHA8	P29322	1005 aa	Predicted RBP	5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	HOXA13	P31271	388 aa	Predicted RBP	5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	CLCN1	P35523	988 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	MLH1	P40692	756 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	EIF2D	P41214	584 aa	Known RBP	5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	SCNN1G	P51170	649 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	CLCN3	P51790	818 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	CDC42EP1	Q00587	391 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	TWF1	Q12792	350 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	FOXD4	Q12950	439 aa	Predicted RBP	5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	UBE3C	Q15386	1083 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	QRICH1	Q2TAL8	776 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	GAB4	Q2WGN9	574 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	ARHGAP15	Q53QZ3	475 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	UBXN11	Q5T124	520 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	EMC10	Q5UCC4	262 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	ANKS3	Q6ZW76	656 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	TRMT11	Q7Z4G4	463 aa	Known RBP	5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	NLRX1	Q86UT6	975 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	CEP57	Q86XR8	500 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	STK11IP	Q8N1F8	1099 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	METTL13	Q8N6R0	699 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	KRI1	Q8N9T8	703 aa	Known RBP	5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	C14orf79	Q96F83	325 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	FOXC2	Q99958	501 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	SLC29A3	Q9BZD2	475 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	TASP1	Q9H6P5	420 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	CYP4F11	Q9HBI6	524 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	MIOS	Q9NXC5	875 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	SEPT10	Q9P0V9	454 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	USP36	Q9P275	1121 aa	Known RBP	5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	EIF2B4	Q9UI10	523 aa	Known RBP	5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	AKT3	Q9Y243	479 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	TTLL8	A6PVC2	850 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	MAFG	O15525	162 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	NMT2	O60551	498 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	SORBS2	O94875	1100 aa	Known RBP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	TNFSF15	O95150	251 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	IGLV3-19	P01714	112 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	CD44	P16070	742 aa	Known RBP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	ABCB4	P21439	1286 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	DDX6	P26196	483 aa	Known RBP eCLIP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	TMOD1	P28289	359 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	RNASE9	P60153	205 aa	Known RBP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	CYP4A11	Q02928	519 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	ORC1	Q13415	861 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	DHX8	Q14562	1220 aa	Known RBP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	ZNF268	Q14587	947 aa	Predicted RBP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	INF2	Q27J81	1249 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	KCNT1	Q5JUK3	1230 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	GPR158	Q5T848	1215 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	TCTN3	Q6NUS6	607 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	DTX1	Q86Y01	620 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	GPIHBP1	Q8IV16	184 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	WWC1	Q8IX03	1113 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	SMG8	Q8ND04	991 aa	Known RBP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	WDR36	Q8NI36	951 aa	Known RBP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	RIN3	Q8TB24	985 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	OSCP1	Q8WVF1	389 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	TOE1	Q96GM8	510 aa	Known RBP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	TMEM47	Q9BQJ4	181 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	PAAF1	Q9BRP4	392 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	GCOM2	Q9BZD3	368 aa	Predicted RBP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	INO80B	Q9C086	356 aa	Predicted RBP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	TM9SF3	Q9HD45	589 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	CD93	Q9NPY3	652 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	RTEL1	Q9NZ71	1219 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	SLC9A2	Q9UBY0	812 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	MTMR7	Q9Y216	660 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	TP53TG5	Q9Y2B4	290 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	ENTPD2	Q9Y5L3	495 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	SLCO1B1	Q9Y6L6	691 aa		5.53	□□□□□ -1.52
MSI2-216	ENST00000582772	ANK3	Q12955	4377 aa	Known RBP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	PMS2P1	A4D2B8	440 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	EFCAB7	A8K855	629 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	TMEM189-UBE2V1	I3L0A0	370 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	KCNK3	O14649	394 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	SPRY1	O43609	319 aa	Predicted RBP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	TRAK2	O60296	914 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	SHOX2	O60902	331 aa	Predicted RBP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	PRKCB	P05771	671 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	POLR2M	P0CAP2	368 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	RARG	P13631	454 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	PROZ	P22891	400 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	SLC5A2	P31639	672 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	TIE1	P35590	1138 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	TNFRSF4	P43489	277 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	NOP2	P46087	812 aa	Known RBP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	ACTR2	P61160	394 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	EXOSC9	Q06265	439 aa	Known RBP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	PLD1	Q13393	1074 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	ART3	Q13508	389 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	WDR43	Q15061	677 aa	Known RBP eCLIP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	ADGRF4	Q8IZF3	695 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	CMTM8	Q8IZV2	173 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	NLRP7	Q8WX94	980 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	NDRG1	Q92597	394 aa	Known RBP	5.52	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms