RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PRSS55Q6UWB4 352 aaPredicted RBP14.39□□□□□ -0.11
CSNK1D-220ENST00000581737 ADGRF2Q8IZF7 708 aa14.39□□□□□ -0.11
CSNK1D-220ENST00000581737 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
CSNK1D-220ENST00000581737 DNAI2Q9GZS0 605 aa14.39□□□□□ -0.11
CSNK1D-220ENST00000581737 NIF3L1Q9GZT8 377 aa14.39□□□□□ -0.11
CSNK1D-220ENST00000581737 LUC7LQ9NQ29 371 aaKnown RBP14.39□□□□□ -0.11
CSNK1D-220ENST00000581737 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
CSNK1D-220ENST00000581737 DPP7Q9UHL4 492 aa14.39□□□□□ -0.11
CSNK1D-220ENST00000581737 L1RE1Q9UN81 338 aa14.39□□□□□ -0.11
CSNK1D-220ENST00000581737 CACNA1HO95180 2353 aa14.39□□□□□ -0.11
CSNK1D-220ENST00000581737 GTPBP10A4D1E9 387 aaKnown RBP14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 C2CD4DB7Z1M9 353 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 TEX28O15482 410 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 TACC1O75410 805 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 KLRC2P26717 231 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 PCSK1P29120 753 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 WSCD1Q658N2 575 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 SLC8B1Q6J4K2 584 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 TTC39CQ8N584 583 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 KLHL5Q96PQ7 755 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 DNAJC7Q99615 494 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 SNX25Q9H3E2 840 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 FAM124BQ9H5Z6 455 aaPredicted RBP14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 CYP3A43Q9HB55 503 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 FBXL5Q9UKA1 691 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 PAXBP1Q9Y5B6 917 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 TIMM13Q9Y5L4 95 aaPredicted RBP14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 ZFHX4Q86UP3 3567 aa14.38□□□□□ -0.11
CSNK1D-220ENST00000581737 WDR87Q6ZQQ6 2873 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 CLASP2O75122 1294 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 GLUD1P00367 558 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 ASGR2P07307 311 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 WEE2P0C1S8 567 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 WARSP23381 471 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 NBL1P41271 181 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 YWHAEP62258 255 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 KRT83P78385 493 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 CDK17Q00537 523 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 TSPY1Q01534 308 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 RAB33AQ14088 237 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 SOWAHAQ2M3V2 549 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 GBP6Q6ZN66 633 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 LIMS2Q7Z4I7 341 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 SEMA4DQ92854 862 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 CLSTN3Q9BQT9 956 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 PI4K2AQ9BTU6 479 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 POMKQ9H5K3 350 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 GCNT4Q9P109 453 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 CEP72Q9P209 647 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 CDY1Q9Y6F8 540 aa14.37□□□□□ -0.11
CSNK1D-220ENST00000581737 DMXL1Q9Y485 3027 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 TBC1D4O60343 1298 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 TNNT1P13805 278 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 CPB1P15086 417 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 RPL17P18621 184 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 RFX1P22670 979 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 TBXAS1P24557 533 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 OR1D2P34982 312 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 SMARCB1Q12824 385 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 EXOC3L4Q17RC7 722 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 TPGS2Q68CL5 300 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 SCARA3Q6AZY7 606 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 SCARA5Q6ZMJ2 495 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 CCDC170Q8IYT3 715 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 KIF18AQ8NI77 898 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 HDAC7Q8WUI4 952 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 CASP10Q92851 521 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 PPP1R13BQ96KQ4 1090 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 FAM81BQ96LP2 452 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 C16orf45Q96MC5 204 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 ACBD6Q9BR61 282 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 BCO2Q9BYV7 579 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 INTS2Q9H0H0 1204 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 SMYD3Q9H7B4 428 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 DZANK1Q9NVP4 752 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 DDX43Q9NXZ2 648 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 MAFFQ9ULX9 164 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 MYO6Q9UM54 1294 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 POLIQ9UNA4 740 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 PPP2R2CQ9Y2T4 447 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 SPTBN4Q9H254 2564 aa14.36□□□□□ -0.11
CSNK1D-220ENST00000581737 MTCL1Q9Y4B5 1905 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 GABRDO14764 452 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 ASPAP45381 313 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 CLCN4P51793 760 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 ROR1Q01973 937 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 LIN9Q5TKA1 542 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 SPOPLQ6IQ16 392 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 RTL10Q7L3V2 364 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 TMEM139Q8IV31 216 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 GLYCTKQ8IVS8 523 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 DCP1BQ8IZD4 617 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 C12orf76Q8N812 135 aaPredicted RBP14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 EHBP1Q8NDI1 1231 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 OR6B3Q8NGW1 331 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 KBTBD7Q8WVZ9 684 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 SYN2Q92777 582 aaPredicted RBP14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 TTYH3Q9C0H2 523 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 PLEKHA4Q9H4M7 779 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms