RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 DCLRE1AQ6PJP8 1040 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PRSS55Q6UWB4 352 aaPredicted RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RSPO2Q6UXX9 243 aaPredicted RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FAM183BPQ6ZVS7 135 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ZNF365Q70YC5 407 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SLFN11Q7Z7L1 901 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 DAAM2Q86T65 1068 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 NT5DC3Q86UY8 548 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FAM35AQ86V20 835 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 UNC93AQ86WB7 457 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ERICH1Q86X53 443 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CEP57Q86XR8 500 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 XYLT1Q86Y38 959 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ABI1Q8IZP0 508 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CRYBG2Q8N1P7 616 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TTC9BQ8N6N2 239 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ZMIZ2Q8NF64 920 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TRIM58Q8NG06 486 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ALG3Q92685 438 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ACSF2Q96CM8 615 aaPredicted RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 DDX27Q96GQ7 796 aaKnown RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FAXDC2Q96IV6 333 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SUSD3Q96L08 255 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MCEEQ96PE7 176 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ALS2CR12Q96Q35 445 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TSPAN18Q96SJ8 248 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PKMYT1Q99640 499 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SMOQ99835 787 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MED10Q9BTT4 135 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MIS12Q9H081 205 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 LHX5Q9H2C1 402 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CWH43Q9H720 699 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ELAC1Q9H777 363 aaKnown RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ABCB6Q9NP58 842 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 LUC7LQ9NQ29 371 aaKnown RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 AVENQ9NQS1 362 aaPredicted RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ST7Q9NRC1 585 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 METTL5Q9NRN9 209 aaKnown RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 KRT82Q9NSB4 513 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 KLHL11Q9NVR0 708 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CXXC1Q9P0U4 656 aaPredicted RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ANAPC7Q9UJX3 599 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SNX12Q9UMY4 172 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PCDHB8Q9UN66 801 aa6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MRPL42Q9Y6G3 142 aaKnown RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MYH9P35579 1960 aaKnown RBP6.51□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ATP8B3O60423 1300 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ZBBXA8MT70 800 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PAPSS1O43252 624 aaPredicted RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MED7O43513 233 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TADA2AO75478 443 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SOAT2O75908 522 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 DGKIO75912 1065 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MTA2O94776 668 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ARHGEF15O94989 841 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 VNN2O95498 520 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CYP11A1P05108 521 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 LCP1P13796 627 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RPL17P18621 184 aaKnown RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TFE3P19532 575 aaPredicted RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ARPP19P56211 112 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MAP3K7CLP57077 242 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PITX1P78337 314 aaPredicted RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 C2orf54Q08AI8 447 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 IKBKEQ14164 716 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TCEAL1Q15170 157 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ATP13A4Q4VNC1 1196 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 INTS6LQ5JSJ4 861 aaKnown RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RTP2Q5QGT7 225 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PPP1R15BQ5SWA1 713 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SH3PXD2AQ5TCZ1 1133 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FAM171A1Q5VUB5 890 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 OVOS1Q6IE37 1185 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 OR6B2Q6IFH4 312 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MFSD5Q6N075 450 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FUT10Q6P4F1 479 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 HFE2Q6ZVN8 426 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PEX26Q7Z412 305 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ANKS1BQ7Z6G8 1248 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RHOT2Q8IXI1 618 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RNF10Q8N5U6 811 aaKnown RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ARFGAP1Q8N6T3 406 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 NOA1Q8NC60 698 aaKnown RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SLC35F5Q8WV83 523 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 AUTS2Q8WXX7 1259 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 KHSRPQ92945 711 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CD101Q93033 1021 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PCED1BQ96HM7 432 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 UROC1Q96N76 676 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PGLYRP2Q96PD5 576 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FAM193BQ96PV7 902 aaPredicted RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 OSBPL9Q96SU4 736 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 HNRNPABQ99729 332 aaKnown RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 HERPUD2Q9BSE4 406 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SLC4A5Q9BY07 1137 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ADAM33Q9BZ11 813 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RC3H2Q9HBD1 1191 aaKnown RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 IL23AQ9NPF7 189 aa6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RNF216Q9NWF9 866 aaPredicted RBP6.5□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CDC23Q9UJX2 597 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms