RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 CAPN8A6NHC0 703 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 LARGE1O95461 756 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 NTRK1P04629 796 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 CPA1P15085 419 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 CDC25CP30307 473 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 NMT1P30419 496 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 OPRD1P41143 372 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 DPP6P42658 865 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 CDR1P51861 262 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 OSTNP61366 133 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 YWHAHQ04917 246 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 PDGFRLQ15198 375 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 GAB4Q2WGN9 574 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 EML3Q32P44 896 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 ATF7IP2Q5U623 682 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 PPP4R3AQ6IN85 833 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 BAHD1Q8TBE0 780 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 KIFC3Q9BVG8 833 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 CDT1Q9H211 546 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 PTPRHQ9HD43 1115 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 TDP1Q9NUW8 608 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 SLC38A7Q9NVC3 462 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 CNTN3Q9P232 1028 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 TUBGCP4Q9UGJ1 667 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 PCOLCE2Q9UKZ9 415 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 COL6A6A6NMZ7 2263 aa8.37□□□□□ -1.07
SMARCE1-217ENST00000580654 FAM149AA5PLN7 773 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 SGK1O00141 431 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 MARCH6O60337 910 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 F11P03951 625 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 ATXN1LP0C7T5 689 aaKnown RBP8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 IFNAR1P17181 557 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 AARSP49588 968 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 AKAP17AQ02040 695 aaKnown RBP8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 CFHR1Q03591 330 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 ZNF33AQ06730 810 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 MESP2Q0VG99 397 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 MTF1Q14872 753 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 ZNF77Q15935 545 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 TXNDC8Q6A555 127 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 ITIH5Q86UX2 942 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 SLC41A1Q8IVJ1 513 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 CPA6Q8N4T0 437 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 ALLCQ8N6M5 410 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 WHAMMQ8TF30 809 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 OSCP1Q8WVF1 389 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 SPACA7Q96KW9 195 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 AIFM3Q96NN9 605 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 ESYT1Q9BSJ8 1104 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 KIF9Q9HAQ2 790 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 POLD4Q9HCU8 107 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 WNT6Q9Y6F9 365 aa8.36□□□□□ -1.07
SMARCE1-217ENST00000580654 PTPRQQ9UMZ3 2332 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 OR6C75A6NL08 312 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 ABLIM1O14639 778 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 TLX3O43711 291 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 ADAM23O75077 832 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 TADA3O75528 432 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 KLF8O95600 359 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 SYPP08247 313 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 HMGA1P17096 107 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 MARCKSP29966 332 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 AVPR1AP37288 418 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 EIF2S3P41091 472 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 YARSP54577 528 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 NLRP12P59046 1061 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 BFSP1Q12934 665 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 MYBPC2Q14324 1141 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 ZNF268Q14587 947 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 TSGA10IPQ3SY00 556 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 EARS2Q5JPH6 523 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 EMC10Q5UCC4 262 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 CC2D1AQ6P1N0 951 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 Q6ZUG5 572 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 KRT25Q7Z3Z0 450 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 NEK8Q86SG6 692 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 IL17RCQ8NAC3 791 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 TXNDC5Q8NBS9 432 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 STKLD1Q8NE28 680 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 MCPH1Q8NEM0 835 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 OR10T2Q8NGX3 314 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 GIPC2Q8TF65 315 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 BRF1Q92994 677 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 EXOC4Q96A65 974 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 FCRL3Q96P31 734 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 SLC22A12Q96S37 553 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 CCDC94Q9BW85 323 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 OXCT2Q9BYC2 517 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 LINC00597Q9H2U6 94 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 NCOA5Q9HCD5 579 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 ZDHHC4Q9NPG8 344 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 TOPORSQ9NS56 1045 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 DUS2Q9NX74 493 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 HSFX1Q9UBD0 423 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 TNFSF13BQ9Y275 285 aa8.35□□□□□ -1.07
SMARCE1-217ENST00000580654 MYO18AQ92614 2054 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 MYOFQ9NZM1 2061 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 GOLGA4Q13439 2230 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 MGAQ8IWI9 3026 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 A0A1W2PQD8 194 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms