RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 HCFC1R1Q9NWW0 138 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 AFF4Q9UHB7 1163 aaKnown RBP10.56□□□□□ -0.72
GGA3-209ENST00000580646 CDH7Q9ULB5 785 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 ZDBF2Q9HCK1 2354 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 DENND4CQ5VZ89 1909 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 BECN2A8MW95 431 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 NARSO43776 548 aaKnown RBP10.55□□□□□ -0.72
GGA3-209ENST00000580646 RHOP08100 348 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 CPB1P15086 417 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 PTPN2P17706 415 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 TBXAS1P24557 533 aaPredicted RBP10.55□□□□□ -0.72
GGA3-209ENST00000580646 ASPAP45381 313 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 TPM4P67936 248 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 TSPY1Q01534 308 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 GCNT1Q02742 428 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 ADCY1Q08828 1119 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 HTR4Q13639 388 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 KRT31Q15323 416 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 UNC93AQ86WB7 457 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 EHBP1Q8NDI1 1231 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 ST13P5Q8NFI4 369 aaPredicted RBP10.55□□□□□ -0.72
GGA3-209ENST00000580646 JAKMIP2Q96AA8 810 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 MMS19Q96T76 1030 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 PRRX2Q99811 253 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 RTP3Q9BQQ7 232 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 ZCWPW1Q9H0M4 648 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 APOBEC3GQ9HC16 384 aaKnown RBP10.55□□□□□ -0.72
GGA3-209ENST00000580646 CBX8Q9HC52 389 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 AVENQ9NQS1 362 aaPredicted RBP10.55□□□□□ -0.72
GGA3-209ENST00000580646 DDX43Q9NXZ2 648 aaKnown RBP10.55□□□□□ -0.72
GGA3-209ENST00000580646 FBXL21Q9UKT6 434 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 CDH9Q9ULB4 789 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 MRPS23Q9Y3D9 190 aaKnown RBP10.55□□□□□ -0.72
GGA3-209ENST00000580646 INSL5Q9Y5Q6 135 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 PATJQ8NI35 1801 aa10.55□□□□□ -0.72
GGA3-209ENST00000580646 ZNF638Q14966 1978 aaKnown RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 OR4Q2P0C623 313 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 SRFP11831 508 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 TRIM21P19474 475 aaKnown RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 GNL1P36915 607 aaPredicted RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 YWHAEP62258 255 aaKnown RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 MAPRE1Q15691 268 aaKnown RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 NFE2Q16621 373 aaPredicted RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 EXOC3L4Q17RC7 722 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 INTS6LQ5JSJ4 861 aaKnown RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 SPOPLQ6IQ16 392 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 FAM171BQ6P995 826 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 PARM1Q6UWI2 310 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 GBP6Q6ZN66 633 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 ENOSF1Q7L5Y1 443 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 APTXQ7Z2E3 356 aaKnown RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 OSTM1Q86WC4 334 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 CREBRFQ8IUR6 639 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 DCP1BQ8IZD4 617 aaKnown RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 PRSS33Q8NF86 280 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 OR10T2Q8NGX3 314 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 FGF14Q92915 247 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 CFAP54Q96N23 3096 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 NT5C1BQ96P26 610 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 PKMYT1Q99640 499 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 CORO1BQ9BR76 489 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 PI4K2AQ9BTU6 479 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 RPP25Q9BUL9 199 aaKnown RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 DNAI2Q9GZS0 605 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 MFSD1Q9H3U5 465 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 TSPY26PQ9H489 355 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 GCNT4Q9P109 453 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 NXF1Q9UBU9 619 aaKnown RBP10.54□□□□□ -0.72
GGA3-209ENST00000580646 WNT16Q9UBV4 365 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 DAAM1Q9Y4D1 1078 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 NUMBLQ9Y6R0 609 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 ZNF318Q5VUA4 2279 aa10.54□□□□□ -0.72
GGA3-209ENST00000580646 LRRN2O75325 713 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 VNN2O95498 520 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 CFHP08603 1231 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 CDK11BP21127 795 aaKnown RBP10.53□□□□□ -0.72
GGA3-209ENST00000580646 RFX1P22670 979 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 CLCN5P51795 746 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 NUBP1P53384 320 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 COPB1P53618 953 aaKnown RBP10.53□□□□□ -0.72
GGA3-209ENST00000580646 TWF1Q12792 350 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 DUSP4Q13115 394 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 CUL2Q13617 745 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 SLC5A9Q2M3M2 681 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 HSP90AA4PQ58FG1 418 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 ASTLQ6HA08 431 aaPredicted RBP10.53□□□□□ -0.72
GGA3-209ENST00000580646 IQCEQ6IPM2 695 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 TRIM65Q6PJ69 517 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 MTSS1LQ765P7 747 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 NPAS3Q8IXF0 933 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 SIX5Q8N196 739 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 CRYBG2Q8N1P7 616 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 ELMOD1Q8N336 334 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 FLCNQ8NFG4 579 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 OR6B3Q8NGW1 331 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 SPPL2BQ8TCT7 592 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 ING5Q8WYH8 240 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 MCRS1Q96EZ8 462 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 FUBP3Q96I24 572 aaKnown RBP eCLIP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms