RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 GPR88Q9GZN0 384 aa12.47□□□□□ -0.41
SNORD3C-201ENST00000580533 DEF6Q9H4E7 631 aa12.47□□□□□ -0.41
SNORD3C-201ENST00000580533 PLEKHA4Q9H4M7 779 aa12.47□□□□□ -0.41
SNORD3C-201ENST00000580533 TLE6Q9H808 572 aa12.47□□□□□ -0.41
SNORD3C-201ENST00000580533 GTF3C4Q9UKN8 822 aa12.47□□□□□ -0.41
SNORD3C-201ENST00000580533 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.47□□□□□ -0.41
SNORD3C-201ENST00000580533 PRRG1O14668 218 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 IPO7O95373 1038 aaKnown RBP12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 LSM8O95777 96 aaKnown RBP12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 CNPP09543 421 aaKnown RBP12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 SETSIPP0DME0 302 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 ATF2P15336 505 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 DNAJB1P25685 340 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 MAGEA11P43364 429 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 ALDH1A3P47895 512 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 FXR1P51114 621 aaKnown RBP eCLIP12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 CDR2Q01850 454 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 VEPH1Q14D04 833 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 HABP4Q5JVS0 413 aaKnown RBP12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 LCLAT1Q6UWP7 414 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 ELMOD1Q8N336 334 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 CCDC112Q8NEF3 446 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 SLC2A14Q8TDB8 520 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 AUTS2Q8WXX7 1259 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 PCED1BQ96HM7 432 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 TWNKQ96RR1 684 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 RTP3Q9BQQ7 232 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 ZNF518BQ9C0D4 1074 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 DPEP3Q9H4B8 488 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 DMAP1Q9NPF5 467 aaPredicted RBP12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 LUC7LQ9NQ29 371 aaKnown RBP12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 CRTAC1Q9NQ79 661 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 DZANK1Q9NVP4 752 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 ABI2Q9NYB9 513 aaPredicted RBP12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 HMGXB4Q9UGU5 601 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 AJAP1Q9UKB5 411 aaPredicted RBP12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 PCDHGC3Q9UN70 934 aa12.46□□□□□ -0.41
SNORD3C-201ENST00000580533 PLXNA4Q9HCM2 1894 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 WDR27A2RRH5 827 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 MYBPHLA2RUH7 354 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 MTMR11A4FU01 709 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 HIDE1A8MVS5 230 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 M0QYV0 167 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 ABLIM3O94929 683 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 RPL17P18621 184 aaKnown RBP12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 POU3F3P20264 500 aaPredicted RBP12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 TNFAIP3P21580 790 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 ADKP55263 362 aaKnown RBP12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 CDK17Q00537 523 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 ADCY1Q08828 1119 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 BST2Q10589 180 aaKnown RBP12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 ORC1Q13415 861 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 GOLGA7BQ2TAP0 167 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 CYP26C1Q6V0L0 522 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 SPRED2Q7Z698 418 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 ITIH5Q86UX2 942 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 FAM35AQ86V20 835 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 SLC47A2Q86VL8 602 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 GLYCTKQ8IVS8 523 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 TCEAL8Q8IYN2 117 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 TXLNBQ8N3L3 684 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 ANKRD52Q8NB46 1076 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 TMEM35BQ8NCS4 154 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 EPS8L1Q8TE68 723 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 ZNF606Q8WXB4 792 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 CASP10Q92851 521 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 PKMYT1Q99640 499 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 UBXN6Q9BZV1 441 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 PRDM12Q9H4Q4 367 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 CYP4F11Q9HBI6 524 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 PNPLA8Q9NP80 782 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 KRT82Q9NSB4 513 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 FAM49BQ9NUQ9 324 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 SEPT11Q9NVA2 429 aaKnown RBP12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 TSPAN16Q9UKR8 245 aa12.45□□□□□ -0.42
SNORD3C-201ENST00000580533 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.45□□□□□ -0.421e-323■■■■■ 97.5
SNORD3C-201ENST00000580533 SSU72P8A0A1W2PR75 194 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 RNF225M0QZC1 329 aaPredicted RBP12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 O00370 1275 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 TGM5O43548 720 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 CLASP2O75122 1294 aaKnown RBP12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 ATP2C2O75185 946 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 AP1G2O75843 785 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 CSPG5O95196 566 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 LRG1P02750 347 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 NPR3P17342 541 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 BRD2P25440 801 aaKnown RBP12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 ADORA2BP29275 332 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 IRS1P35568 1242 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 GRIK1P39086 918 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 CLCN4P51793 760 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 EPHB3P54753 998 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 CAMK1Q14012 370 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 TAF12Q16514 161 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 DUSP6Q16828 381 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 MGAT5BQ3V5L5 792 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 PPP1R26Q5T8A7 1209 aaPredicted RBP12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 IRF2BP2Q7Z5L9 587 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 PALB2Q86YC2 1186 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 TMTC1Q8IUR5 882 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms