RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 SPATA17Q96L03 361 aa17.5■□□□□ 0.39
IFT20-210ENST00000580357 LRRC3Q9BY71 257 aa17.5■□□□□ 0.39
IFT20-210ENST00000580357 NIF3L1Q9GZT8 377 aa17.5■□□□□ 0.39
IFT20-210ENST00000580357 SMYD3Q9H7B4 428 aa17.5■□□□□ 0.39
IFT20-210ENST00000580357 CRTAC1Q9NQ79 661 aa17.5■□□□□ 0.39
IFT20-210ENST00000580357 DENND4AQ7Z401 1863 aa17.5■□□□□ 0.39
IFT20-210ENST00000580357 TSC2P49815 1807 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 SOBPA7XYQ1 873 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 TRIM66O15016 1216 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 SOAT2O75908 522 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 ATF6P18850 670 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 ANXA13P27216 316 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 GRIK1P39086 918 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 FMO5P49326 533 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 PSMC1P62191 440 aaKnown RBP17.49■□□□□ 0.39
IFT20-210ENST00000580357 SLC5A9Q2M3M2 681 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 MDH1BQ5I0G3 518 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 TRIM67Q6ZTA4 783 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 GPT2Q8TD30 523 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 GIPC2Q8TF65 315 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 PCED1BQ96HM7 432 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 GCNAQ96QF7 691 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 ELOVL4Q9GZR5 314 aa17.49■□□□□ 0.39
IFT20-210ENST00000580357 C5orf42Q9H799 3197 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 ASGR2P07307 311 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 BDNFP23560 247 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 ASPAP45381 313 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 NDST1P52848 882 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 YWHAEP62258 255 aaKnown RBP17.48■□□□□ 0.39
IFT20-210ENST00000580357 INCA1Q0VD86 236 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 HTR4Q13639 388 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 DDR2Q16832 855 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 CBWD6Q4V339 395 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 CBWD3Q5JTY5 395 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 CBWD5Q5RIA9 395 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 SPOPLQ6IQ16 392 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 BMP8AQ7Z5Y6 402 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 TMC8Q8IU68 726 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 FAM114A1Q8IWE2 563 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 TRIM59Q8IWR1 403 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 SCN4BQ8IWT1 228 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 ING5Q8WYH8 240 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 SEMA4DQ92854 862 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 MYLPFQ96A32 169 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 TCEAL4Q96EI5 215 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 TRMT2BQ96GJ1 504 aaKnown RBP17.48■□□□□ 0.39
IFT20-210ENST00000580357 C8orf48Q96LL4 319 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 LPIN3Q9BQK8 851 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 NT5C1AQ9BXI3 368 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 ATXN3LQ9H3M9 355 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 APOBEC3GQ9HC16 384 aaKnown RBP17.48■□□□□ 0.39
IFT20-210ENST00000580357 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.48■□□□□ 0.39
IFT20-210ENST00000580357 MUC6Q6W4X9 2439 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 MYO10Q9HD67 2058 aa17.48■□□□□ 0.39
IFT20-210ENST00000580357 PRR33A8MZF0 331 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 HCRTO43612 131 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 ECI2O75521 394 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 CEBPBP17676 345 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 DDX6P26196 483 aaKnown RBP eCLIP17.47■□□□□ 0.39
IFT20-210ENST00000580357 GABRR2P28476 465 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 WEE1P30291 646 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 CCR2P41597 374 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 KCNH2Q12809 1159 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 RBM43Q6ZSC3 357 aaKnown RBP17.47■□□□□ 0.39
IFT20-210ENST00000580357 SHKBP1Q8TBC3 707 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 ELSPBP1Q96BH3 223 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 MYRFLQ96LU7 910 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 SDCBP2Q9H190 292 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 TRPV4Q9HBA0 871 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 ZFP14Q9HCL3 533 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 DUSP12Q9UNI6 340 aa17.47■□□□□ 0.39
IFT20-210ENST00000580357 A0A1W2PRU2 124 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 SLC38A8A6NNN8 435 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 MOSPD3O75425 235 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 NOL4O94818 638 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 AFPP02771 609 aaKnown RBP17.46■□□□□ 0.39
IFT20-210ENST00000580357 HMGA1P17096 107 aaKnown RBP17.46■□□□□ 0.39
IFT20-210ENST00000580357 TBXAS1P24557 533 aaPredicted RBP17.46■□□□□ 0.39
IFT20-210ENST00000580357 RAP1GAPP47736 663 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 PPP3CCP48454 512 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 SASS6Q6UVJ0 657 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 PARM1Q6UWI2 310 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 GAREM2Q75VX8 874 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 ACOT1Q86TX2 421 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 SMARCD2Q92925 531 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 MED10Q9BTT4 135 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 B3GNT5Q9BYG0 378 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 DPEP3Q9H4B8 488 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 THAP9Q9H5L6 903 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 SLITRK6Q9H5Y7 841 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 TASP1Q9H6P5 420 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 WNT16Q9UBV4 365 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 NME7Q9Y5B8 376 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 NUMBLQ9Y6R0 609 aa17.46■□□□□ 0.39
IFT20-210ENST00000580357 DOCK6Q96HP0 2047 aa17.45■□□□□ 0.38
IFT20-210ENST00000580357 NOTCH4Q99466 2003 aa17.45■□□□□ 0.38
IFT20-210ENST00000580357 FAM86C2PA6NEL3 165 aa17.45■□□□□ 0.38
IFT20-210ENST00000580357 TMEM221A6NGB7 291 aa17.45■□□□□ 0.38
IFT20-210ENST00000580357 M0R296 226 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms