RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TJP2Q9UDY2 1190 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 NR2E1Q9Y466 385 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RTN2O75298 545 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ITGB8P26012 769 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GJA8P48165 433 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 BPIFB4P59827 614 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GPC5P78333 572 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 BFSP2Q13515 415 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 LRRC26Q2I0M4 334 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ZNF598Q86UK7 904 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ZNF280BQ86YH2 543 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RHOT2Q8IXI1 618 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 WDTC1Q8N5D0 677 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 C1orf131Q8NDD1 294 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 OR6B3Q8NGW1 331 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ARMC5Q96C12 935 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 HES6Q96HZ4 224 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RUFY1Q96T51 708 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RGS18Q9NS28 235 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 FAM49BQ9NUQ9 324 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 STXBP5LQ9Y2K9 1186 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GIT1Q9Y2X7 761 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ATP8B3O60423 1300 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 DCDC2CA8MYV0 355 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PIK3R2O00459 728 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CES2O00748 559 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ITGB1P05556 798 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 COL6A1P12109 1028 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 LLGL1Q15334 1064 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 DENND1BQ6P3S1 775 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 SLC24A5Q71RS6 500 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 OR2W6PQ8NHA6 318 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 UBA3Q8TBC4 463 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RUBCNQ92622 972 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ZNF653Q96CK0 615 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TMEM176AQ96HP8 235 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 C11orf70Q9BRQ4 267 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ENPP3O14638 875 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 SART1O43290 800 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CAND2O75155 1236 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RRM1P23921 792 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ACAT1P24752 427 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CTCFP49711 727 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GTF2A1P52655 376 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CLLU1OSQ5K130 101 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ACAD10Q6JQN1 1059 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 EMBQ6PCB8 327 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ANKRD33Q7Z3H0 272 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TMCO2Q7Z6W1 182 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 HACE1Q8IYU2 909 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 LRRC52Q8N7C0 313 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 KBTBD7Q8WVZ9 684 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 AMACRQ9UHK6 382 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CYTH4Q9UIA0 394 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 BARX2Q9UMQ3 279 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ALG6Q9Y672 507 aa13.42□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ATP2C2O75185 946 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 B3GAT3O94766 335 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CYP1A1P04798 512 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 P4HA1P13674 534 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CYP3A5P20815 502 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TAF6P49848 677 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 NOMO3P69849 1222 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PLEKHG4Q58EX7 1191 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 AADACL2Q6P093 401 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 MMS22LQ6ZRQ5 1243 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 FAM76AQ8TAV0 307 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PPM1EQ8WY54 764 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TRIM31Q9BZY9 425 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 NEUROG2Q9H2A3 272 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CENPHQ9H3R5 247 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 SQORQ9Y6N5 450 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PODXLO00592 558 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 DDHD2O94830 711 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GZMAP12544 262 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 FLT3P36888 993 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 BRCC3P46736 316 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 WSCD1Q658N2 575 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RNPC3Q96LT9 517 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GDF3Q9NR23 364 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TMEM39AQ9NV64 488 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 WDR70Q9NW82 654 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TMEM59LQ9UK28 342 aa13.41□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CDH23Q9H251 3354 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 A8MXQ7 604 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CYB561D2O14569 222 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 XPOTO43592 962 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 HSF2BPO75031 334 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 NSFP46459 744 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PSMC1P62191 440 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CYP4A22Q5TCH4 519 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 DCAF12L1Q5VU92 463 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 DAB2IPQ5VWQ8 1189 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 OSTM1Q86WC4 334 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 NUP85Q9BW27 656 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CYP3A43Q9HB55 503 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CNOT8Q9UFF9 292 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
CDK5RAP3-217ENST00000580287 SPOPO43791 374 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms